Research/Scholarly/Creative Works

Journal Articles

• Emanuel RHK., Docherty PD., Lunt H. and Campbell RE. (2023) Comparing Literature- and Subreddit-Derived Laboratory Values in Polycystic Ovary Syndrome (PCOS): Validation of Clinical Data Posted on PCOS Reddit Forums. JMIR Formative Research 7 http://dx.doi.org/10.2196/44810.

• Emanuel RHK., Docherty PD., Lunt H. and Möller K. (2023) The effect of activation functions on accuracy, convergence speed, and misclassification confidence in CNN text classification: a comprehensive exploration. Journal of Supercomputing http://dx.doi.org/10.1007/s11227-023-05441-7.

• Jalal NA., Abdulbaki Alshirbaji T., Laufer B., Docherty PD., Neumuth T. and Moeller K. (2023) Analysing multi-perspective patient-related data during laparoscopic gynaecology procedures. Scientific Reports 13(1) http://dx.doi.org/10.1038/s41598-023-28652-7.

• Jalal NA., Alshirbaji TA., Docherty PD., Arabian H., Laufer B., Krueger-Ziolek S., Neumuth T. and Moeller K. (2023) Laparoscopic Video Analysis Using Temporal, Attention, and Multi-Feature Fusion Based-Approaches. Sensors 23(4) http://dx.doi.org/10.3390/s23041958.

• Laufer B., Docherty PD., Murray R., Krueger-Ziolek S., Jalal NA., Hoeflinger F., Rupitsch SJ., Reindl L. and Moeller K. (2023) Sensor Selection for Tidal Volume Determination via Linear Regression—Impact of Lasso versus Ridge Regression. Sensors 23(17) http://dx.doi.org/10.3390/s23177407.

• Laufer B., Hoeflinger F., Docherty PD., Jalal NA., Krueger-Ziolek S., Rupitsch SJ., Reindl L. and Moeller K. (2023) Characterisation and Quantification of Upper Body Surface Motions for Tidal Volume Determination in Lung-Healthy Individuals. Sensors 23(3) http://dx.doi.org/10.3390/s23031278.

• Powell DRL., Petrie FJ., Docherty PD., Arora H. and Williams EMP. (2023) Development of a Head Acceleration Event Classification Algorithm for Female Rugby Union. Annals of Biomedical Engineering 51(6): 1322-1330. http://dx.doi.org/10.1007/s10439-023-03138-9.

• Williams B., Bishop D. and Docherty P. (2023) Assessing the energy storage potential of electric hot water cylinders with stochastic model-based control. Journal of the Royal Society of New Zealand http://dx.doi.org/10.1080/03036758.2023.2197241.

• Zwirner J., Devananthan P., Docherty P., Ondruschka B. and Kabaliuk N. (2023) The use of brain tissue mechanics for time since death estimations. International Journal of Legal Medicine http://dx.doi.org/10.1007/s00414-023-03068-0.

• Abdulbaki Alshirbaji T., Jalal NA., Docherty PD., Neumuth T. and Möller K. (2022) Robustness of Convolutional Neural Networks for Surgical Tool Classification in Laparoscopic Videos from Multiple Sources and of Multiple Types: A Systematic Evaluation. Electronics (Switzerland) 11(18) http://dx.doi.org/10.3390/electronics11182849.

• Cao F., Docherty PD. and Chen XQ. (2022) Contact force estimation for serial manipulator based on weighted moving average with variable span and standard Kalman filter with automatic tuning. International Journal of Advanced Manufacturing Technology 118(9-10): 3443-3456. http://dx.doi.org/10.1007/s00170-021-08036-9.

• Docherty PD., Zaka PA. and Fox-Turnbull W. (2022) A quantitative analysis of the short-term and mid-term benefit of a flipped classroom for foundational engineering dynamics. Research Papers in Education 37(6): 860-874. http://dx.doi.org/10.1080/02671522.2020.1864773.

• Emanuel RHK., Roberts J., Docherty PD., Lunt H., Campbell RE. and Möller K. (2022) A review of the hormones involved in the endocrine dysfunctions of polycystic ovary syndrome and their interactions. Frontiers in Endocrinology 13 http://dx.doi.org/10.3389/fendo.2022.1017468.

• Jalal NA., Arabian H., Alshirbaji TA., Docherty PD., Neumuth T. and Moeller K. (2022) Analysing attention convolutional neural network for surgical tool localisation: a feasibility study. Current Directions in Biomedical Engineering 8(2): 548-551. http://dx.doi.org/10.1515/cdbme-2022-1140.

• Lam N., Murray R., Docherty PD., Te Morenga L. and Chase JG. (2022) The Effects of Additional Local-Mixing Compartments in the DISST Model-Based Assessment of Insulin Sensitivity. Journal of Diabetes Science and Technology 16(5): 1196-1207. http://dx.doi.org/10.1177/19322968211021602.

• Lam NN., Docherty PD. and Murray R. (2022) Practical identifiability of parametrised models: A review of benefits and limitations of various approaches. Mathematics and Computers in Simulation 199: 202-216. http://dx.doi.org/10.1016/j.matcom.2022.03.020.

• McHugh AD., Chase JG., Knopp JL., Ormsbee JJ., Kulawiec DG., Merry TL., Murphy R., Shepherd PR., Burden HJ. and Docherty PD. (2022) The Impact of Exogenous Insulin Input on Calculating Hepatic Clearance Parameters. Journal of Diabetes Science and Technology 16(4): 945-954. http://dx.doi.org/10.1177/1932296820986878.

• Williamson PN., Docherty PD., Khanafer A., Yazdi SG., Jermy M., Kabaliuk N. and Murton B. (2022) Particle Image Velocimetry Evaluation of Hemodynamics Proximal to the Kissing Stent Configuration in the Aorto-Iliac Bifurcation. Journal of Endovascular Therapy http://dx.doi.org/10.1177/15266028221141024.

• Abdulbaki Alshirbaji T., Jalal NA., Docherty PD., Neumuth T. and Möller K. (2021) A deep learning spatial-temporal framework for detecting surgical tools in laparoscopic videos. Biomedical Signal Processing and Control 68 http://dx.doi.org/10.1016/j.bspc.2021.102801.

• Allison SJ., Docherty P., Pons D. and Chase G. (2021) Frequency and duration of ambulance officer exposure to nitrous oxide and methoxyflurane in New Zealand. International Archives of Occupational and Environmental Health.

• Allison SJ., Docherty PD., Pons D. and Chase JG. (2021) Methoxyflurane toxicity: historical determination and lessons for modern patient and occupational exposure. New Zealand Medical Journal 134(1534): 76-90.

• Allison SJ., Docherty PD., Pons D. and Chase JG. (2021) SERUM FLUORIDE LEVELS in AMBULANCE STAFF after COMMENCEMENT of METHOXYFLURANE ADMINISTRATION COMPARED to META-ANALYSIS RESULTS for the GENERAL PUBLIC. International Journal of Occupational Medicine and Environmental Health 34(6): 767-777. http://dx.doi.org/10.13075/IJOMEH.1896.01704.

• Alshirbaji TA., Jalal NA., Docherty PD., Neumuth T. and Moeller K. (2021) Assessing Generalisation Capabilities of CNN Models for Surgical Tool Classification. Current Directions in Biomedical Engineering 7(2): 476-479. http://dx.doi.org/10.1515/cdbme-2021-2121.

• Cao F., Docherty PD., Ni S. and Chen X. (2021) Contact Force and Torque Sensing for Serial Manipulator Based on an Adaptive Kalman Filter with Variable Time Period. Robotics and Computer Integrated Manufacturing.

• Jalal NA., Abdulbaki Alshirbaji T., Docherty PD., Neumuth T. and Moeller K. (2021) Surgical Tool Detection in Laparoscopic Videos by Modeling Temporal Dependencies Between Adjacent Frames. IFMBE Proceedings 80: 1045-1052. http://dx.doi.org/10.1007/978-3-030-64610-3_117.

• Jalal NA., Alshirbaji TA., Docherty PD., Neumuth T., Laufer B. and Moeller K. (2021) Changes of Physiological parameters of the patient during laparoscopic gynaecology. Current Directions in Biomedical Engineering 7(2): 500-503. http://dx.doi.org/10.1515/cdbme-2021-2127.

• Jalal NA., Alshirbaji TA., Laufer B., Docherty PD., Russo SG., Neumuth T. and Moller K. (2021) Effects of Intra-Abdominal Pressure on Lung Mechanics during Laparoscopic Gynaecology. Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS : 2091-2094. http://dx.doi.org/10.1109/EMBC46164.2021.9630753.

• Laufer B., Docherty PD., Murray R., Jalal NA., Hoeflinger F., Reindl L. and Moeller K. (2021) Optimal Sensor Location in a Smart-Shirt to Measure Accurate Tidal Volumes during Abdominal and Thoracic Respiration. Current Directions in Biomedical Engineering 7(2): 574-577. http://dx.doi.org/10.1515/cdbme-2021-2146.

• Wilkie J., Docherty PD., Stieglitz T. and Moller K. (2021) Geometric Generalization of Self Tapping Screw Insertion Model. Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS : 4387-4390. http://dx.doi.org/10.1109/EMBC46164.2021.9630157.

• Wilkie J., Docherty PD., Stieglitz T. and Moller K. (2021) Investigating Torque-Speed Relationship of Self-Tapping Screws. Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS : 4383-4386. http://dx.doi.org/10.1109/EMBC46164.2021.9630356.

• Wilkie J., Docherty PD., Stieglitz T. and Moller K. (2021) Quantifying Accuracy of Self-Tapping Screw Models. Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS : 4391-4394. http://dx.doi.org/10.1109/EMBC46164.2021.9630646.

• Williamson PN., Docherty PD., Yazdi SG., Khanafer A., Kabaliuk N. and Jermy M. (2021) PIV Analysis of Haemodynamics Distal to the Frozen Elephant Trunk Stent Surrogate. Cardiovascular Engineering and Technology 12(4): 373-386. http://dx.doi.org/10.1007/s13239-021-00521-2.

• Williamson PN., Docherty PD., Yazdi SG., Khanafer A., Kabaliuk N., Jermy M. and Geoghegan PH. (2021) Review of the Development of Haemodynamic Modelling Techniques to Capture Flow Behaviour in Arteries Affected by Aneurysm, Atherosclerosis and Stenting. ASME Journal of Biomechanical Engineering.

• Wright F., Docherty PD., Williams E., Greybe D., Arora H. and Kabaliuk N. (2021) An in-silico study of the effect of non-linear skin dynamics on skin-mounted accelerometer inference of skull motion. Biomedical Signal Processing and Control 70 http://dx.doi.org/10.1016/j.bspc.2021.102986.

• Yazdi SG., Docherty PD., Khanafer A., Jermy M., Kabaliuk N., Geoghegan PH. and Williamson P. (2021) In-vitro particle image velocimetry assessment of the endovascular haemodynamic features distal of stent-grafts that are associated with development of limb occlusion. Journal of the Royal Society of New Zealand 51(2): 361-374. http://dx.doi.org/10.1080/03036758.2020.1826988.

• Zhang S., Yuan X., Docherty PD., Yang K. and Li C. (2021) An improved particle swarm optimization algorithm and its application in solving forward kinematics of a 3-DoF parallel manipulator. Proceedings of the Institution of Mechanical Engineers, Part C: Journal of Mechanical Engineering Science 235(5): 896-907. http://dx.doi.org/10.1177/0954406220939109.

• Allison SJ., Docherty PD., Pons D. and Chase JG. (2020) Serum fluoride levels following commencement of methoxyflurane for patient analgesia in an ambulance service. British Journal of Anaesthesia 125(6): e457-e458. http://dx.doi.org/10.1016/j.bja.2020.08.036.

• Allison SJ., Docherty PD., Pons D. and Geoffrey Chase J. (2020) Exposure to methoxyflurane: Low-dose analgesia and occupational exposure. Australasian Journal of Paramedicine 17 http://dx.doi.org/10.33151/ajp.17.712.

• Docherty PD., Fox-Turnbull WH., Naswall K., Homewood A., Bradley H., Zaka P. and Chase JG. (2020) The contribution of gender segregated secondary education on the progression to engineering. Australasian Journal of Engineering Education : 31-38. http://dx.doi.org/10.1080/22054952.2020.1788254.

• Kim KT., Morton S., Howe S., Chiew YS., Knopp JL., Docherty P., Pretty C., Desaive T., Benyo B. and Szlavecz A. (2020) Model-based PEEP titration versus standard practice in mechanical ventilation: A randomised controlled trial. Trials 21(1) http://dx.doi.org/10.1186/s13063-019-4035-7.

• Lam N., Docherty PD., Murray R., Chase JG. and Morenga LT. (2020) Using the Adapted Levenberg-Marquardt method to determine the validity of ignoring insulin and glucose data that is affected by mixing. IFAC-PapersOnLine 53(2): 16341-16346. http://dx.doi.org/10.1016/j.ifacol.2020.12.661.

• Laufer B., Krueger-Ziolek S., Moeller K., Docherty PD., Hoeflinger F. and Reindl L. (2020) An alternative way to measure total lung capacity: A pilot study. Current Directions in Biomedical Engineering 6(3) http://dx.doi.org/10.1515/cdbme-2020-3061.

• Laufer B., Murray R., Docherty PD., Krueger-Ziolek S., Hoeflinger F., Reindl L. and Moeller K. (2020) A Minimal Set of Sensors in a Smart-Shirt to Obtain Respiratory Parameters. IFAC-PapersOnLine 53(2): 16293-16298. http://dx.doi.org/10.1016/j.ifacol.2020.12.627.

• Morton SE., Knopp JL., Chase JG., Möller K., Docherty P., Shaw GM. and Tawhai M. (2020) Authors’ Response to Drs. Ece Salihoglu and Ziya Salihoglu’s Letter to the Editor. Annals of Biomedical Engineering 48(1): 2-3. http://dx.doi.org/10.1007/s10439-019-02339-5.

• Morton SE., Knopp JL., Tawhai MH., Docherty P., Heines SJ., Bergmans DC., Möller K. and Chase JG. (2020) Prediction of lung mechanics throughout recruitment maneuvers in pressure-controlled ventilation. Computer Methods and Programs in Biomedicine 197 http://dx.doi.org/10.1016/j.cmpb.2020.105696.

• Morton SE., Knopp JL., Tawhai MH., Docherty P., Moeller K., Heines SJ., Bergmans DC. and Chase JG. (2020) Virtual Patient Modeling and Prediction Validation for Pressure Controlled Mechanical Ventilation. IFAC-PapersOnLine 53(2): 16221-16226. http://dx.doi.org/10.1016/j.ifacol.2020.12.615.

• Wilkie J., Docherty PD. and Möller K. (2020) Developments in Modelling Bone Screwing. Current Directions in Biomedical Engineering 6(3) http://dx.doi.org/10.1515/cdbme-2020-3029.

• Wilkie J., Docherty PD. and Möller K. (2020) Model-based bone material property identification. At-Automatisierungstechnik 68(11): 913-921. http://dx.doi.org/10.1515/auto-2020-0083.

• Wilson J., Docherty P., Stubbs R., Chase JG. and Krebs J. (2020) Assessment of the Dynamic Insulin Secretion and Sensitivity Test (DISST) Pre and Post Gastric bypass Surgery. Experimental and Clinical Endocrinology and Diabetes 128(3): 164-169. http://dx.doi.org/10.1055/a-0603-3539.

• Allison SJ., Docherty PD., Pons D. and Chase JG. (2019) A bootstrap approach for predicting fluoride toxicity in paramedics after occupational methoxyflurane exposure. IFAC Journal of Systems and Control 9 http://dx.doi.org/10.1016/j.ifacsc.2019.100061.

• Damanhuri NS., Ariffin NNN., Othman NA., Chiew YS., Ralib AM., Noor MBM., Docherty PD. and Geoffrey Chase J. (2019) Assessing SB effort via a non-invasive model-based method in mechanically ventilated patients in Malaysian ICU hospital. Indonesian Journal of Electrical Engineering and Computer Science 15(3): 1232-1240. http://dx.doi.org/10.11591/ijeecs.v15.i3.pp1232-1240.

• Kretschmer J., Docherty PD., Davidson SM., Laufer B. and Möller K. (2019) Comparing three differing approaches to identify a three-parameter gas-exchange model with noisy data. IFAC Journal of Systems and Control 7: 100038. http://dx.doi.org/10.1016/j.ifacsc.2019.100038.

• Morton SE., Knopp JL., Chase JG., Docherty P., Howe SL., Möller K., Shaw GM. and Tawhai M. (2019) Optimising mechanical ventilation through model-based methods and automation. Annual Reviews in Control 48: 369-382. http://dx.doi.org/10.1016/j.arcontrol.2019.05.001.

• Morton SE., Knopp JL., Chase JG., Möller K., Docherty P., Shaw GM. and Tawhai M. (2019) Predictive Virtual Patient Modelling of Mechanical Ventilation: Impact of Recruitment Function. Annals of Biomedical Engineering 47(7): 1626-1641. http://dx.doi.org/10.1007/s10439-019-02253-w.

• Poole M., Murray R., Davidson SM. and Docherty PD. (2019) The quadratic dimensional reduction method for parameter identification. Communications in Nonlinear Science and Numerical Simulation 73: 425-436. http://dx.doi.org/10.1016/j.cnsns.2019.03.001.

• Yazdi SG., Huetter L., Docherty PD., Williamson PN., Clucas D., Jermy M. and Geoghegan PH. (2019) A novel fabrication method for compliant silicone phantoms of arterial geometry for use in particle image velocimetry of haemodynamics. Applied Sciences (Switzerland) 9(18) http://dx.doi.org/10.3390/app9183811.

• Zaka PA., Fox WH. and Docherty PD. (2019) Student perspectives of independent and collaborative learning in a flipped foundational engineering course. Australasian Journal of Educational Technology 35(5): 79-94. http://dx.doi.org/10.14742/ajet.3804.

• Fox-Turnbull WH., Docherty P. and Zaka P. (2018) Learning Engineering through the Flipped Classroom Approach Students' Perspectives. Design and Technology Education: An International Journal.

• Gorrie AWT., Pons DJ., Maples D. and Docherty PD. (2018) Principles of product design in developing countries. Applied System Innovation 1(2): 1-18. http://dx.doi.org/10.3390/asi1020011.

• Holder-Pearson L., Bekisz S., Knopp J., Docherty P., Chase JG. and Desaive T. (2018) Model-based Modified OGTT Insulin Sensitivity Test Design. IFAC-PapersOnLine 51(27): 86-91. http://dx.doi.org/10.1016/j.ifacol.2018.11.662.

• Langdon R., Docherty PD., Mansell EJ. and Chase JG. (2018) Accurate and precise prediction of insulin sensitivity variance in critically ill patients. Biomedical Signal Processing and Control 39: 327-335. http://dx.doi.org/10.1016/j.bspc.2017.08.010.

• Laufer B., Krueger-Ziolek S., Docherty PD., Hoeflinger F., Reindl L. and Moeller K. (2018) Hierarchical analysis of thorax models to measure tidal volume. Current Directions in Biomedical Engineering 4(1): 429-432. http://dx.doi.org/10.1515/cdbme-2018-0102.

• Laufer B., Krueger-Ziolek S., Docherty PD., Hoeflinger F., Reindl L. and Moeller K. (2018) Minimum Number of Sensors in a Smart Shirt to Measure Tidal Volumes. IFAC-PapersOnLine 51(27): 92-97. http://dx.doi.org/10.1016/j.ifacol.2018.11.661.

• Morton S., Docherty P., Dickson J. and Chase JG. (2018) An analysis of the impact of the inclusion of expiration data on the fitting of a predictive pulmonary elastance model. Current Directions in Biomedical Engineering 4(1): 255-258. http://dx.doi.org/10.1515/cdbme-2018-0062.

• Morton SE., Dickson J., Chase JG., Docherty P., Desaive T., Howe SL., Shaw GM. and Tawhai M. (2018) A virtual patient model for mechanical ventilation. Computer Methods and Programs in Biomedicine 165: 77-87. http://dx.doi.org/10.1016/j.cmpb.2018.08.004.

• Morton SE., Dickson JL., Chase JG., Docherty PD., Howe SL., Shaw GM. and Tawhai M. (2018) Basis function identification of lung mechanics in mechanical ventilation for predicting outcomes of therapy changes: A first virtual patient. 51(15): 299-304. http://dx.doi.org/10.1016/j.ifacol.2018.09.151.

• Morton SE., Knopp JL., Chase JG., Docherty PD., Howe SL., Shaw GM. and Tawhai M. (2018) Development of a Predictive Pulmonary Elastance Model to Describe Lung Mechanics throughout Recruitment Manoeuvres. IFAC-PapersOnLine 51(27): 215-220. http://dx.doi.org/10.1016/j.ifacol.2018.11.640.

• Morton SE., Knopp JL., Docherty PD., Shaw GM. and Chase JG. (2018) Validation of a Model-based Method for Estimating Functional Volume Gains during Recruitment Manoeuvres in Mechanical Ventilation. IFAC-PapersOnLine 51(27): 231-236. http://dx.doi.org/10.1016/j.ifacol.2018.11.637.

• Othman NA., Docherty PD., Krebs JD., Bell DA. and Chase JG. (2018) The Need to Calculate Target Glucose Levels When Measuring Changes in Insulin Sensitivity During Interventions for Individuals With Type 2 Diabetes. Journal of Diabetes Science and Technology 12(3): 665-672. http://dx.doi.org/10.1177/1932296817750402.

• Yazdi SG., Geoghegan PH., Docherty PD., Jermy M. and Khanafer A. (2018) A Review of Arterial Phantom Fabrication Methods for Flow Measurement Using PIV Techniques. Annals of Biomedical Engineering 46(11): 1697-1721. http://dx.doi.org/10.1007/s10439-018-2085-8.

• Davidson SM., Docherty PD. and Murray R. (2017) The dimensional reduction method for identification of parameters that trade-off due to similar model roles. Mathematical Biosciences 285: 119-127. http://dx.doi.org/10.1016/j.mbs.2017.01.003.

• Davidson SM., Docherty PD., Kretschmer J. and Murray R. (2017) The Novel Dimensional Reduction Method and Tikhonov Regularisation in Parameter Identification of Non-Linear Ill-Posed Problems. IFAC-PapersOnLine 50(1): 5474-5479. http://dx.doi.org/10.1016/j.ifacol.2017.08.1085.

• Docherty PD., Geoghegan PH., Huetter L., Jermy M. and Sellier M. (2017) Regressive cross-correlation of pressure signals in the region of stenosis: Insights from particle image velocimetry experimentation. Biomedical Signal Processing and Control 32: 143-149. http://dx.doi.org/10.1016/j.bspc.2016.09.025.

• Kretschmer J., Bibiano C., Laufer B., Docherty PD., Chiew YS., Redmond D., Chase JG. and Möller K. (2017) Differences in respiratory mechanics estimation with respect to manoeuvres and mathematical models. Biomedical Physics and Engineering Express 3(1) http://dx.doi.org/10.1088/2057-1976/aa5a31.

• Kretschmer J., Patel A., Docherty PD., Laufer B. and Möller K. (2017) Model based prediction of plateau pressure in mechanically ventilated patients. Current Directions in Biomedical Engineering 3(2): 301-304. http://dx.doi.org/10.1515/cdbme-2017-0062.

• Langdon R., Docherty PD., Chiew YS. and Chase JG. (2017) Extrapolation of a non-linear autoregressive model of pulmonary mechanics. Mathematical Biosciences 284: 32-39. http://dx.doi.org/10.1016/j.mbs.2016.08.001.

• Langdon R., Docherty PD., Schranz C. and Chase JG. (2017) Prediction of high airway pressure using a non-linear autoregressive model of pulmonary mechanics. BioMedical Engineering Online 16(1) http://dx.doi.org/10.1186/s12938-017-0415-y.

• Laufer B., Kretschmer J., Docherty PD., Chiew YS. and Möller K. (2017) Lung mechanics - airway resistance in the dynamic elastance model. Health and Technology 7(1): 61-70. http://dx.doi.org/10.1007/s12553-016-0172-0.

• Laufer B., Kretschmer J., Docherty PD., Chiew YS. and Möller K. (2017) What Does a First Order Model Tell Us about PEEP Wave Maneuvers? Journal of Biomedical Science and Engineering 10(05): 66-75. http://dx.doi.org/10.4236/jbise.2017.105b008.

• Mansell E., Lunt H. and Docherty P. (2017) Laboratory diagnosis of gestational diabetes: An in silico investigation into the effects of pre-analytical processing on the diagnostic sensitivity and specificity of the oral glucose tolerance test. Clinical Biochemistry 50(9): 506-512. http://dx.doi.org/10.1016/j.clinbiochem.2017.01.012.

• Mansell EJ., Docherty PD. and Chase JG. (2017) Shedding light on grey noise in diabetes modelling. Biomedical Signal Processing and Control 31: 16-30. http://dx.doi.org/10.1016/j.bspc.2016.06.007.

• Mansell EJ., Schmidt S., Docherty PD., Nørgaard K., Jørgensen JB. and Madsen H. (2017) Evaluation of pharmacokinetic model designs for subcutaneous infusion of insulin aspart. Journal of Pharmacokinetics and Pharmacodynamics 44(5): 477-489. http://dx.doi.org/10.1007/s10928-017-9535-z.

• Othman NA., Docherty PD., Damanhuri NS. and Chase JG. (2017) Tracking the progression to type 2 diabetes with a proportional-derivative insulin secretion model. Control Engineering Practice 59: 165-172. http://dx.doi.org/10.1016/j.conengprac.2016.10.012.

• Phillips E., Lim K., Woodfield T., Currie MJ., Doudney K., Russell KN., Mitchell NL., Barrell GK., Palmer DN. and Sukhapure M. (2017) Proceedings of the scientific meetings of the Health Research Society of Canterbury 2017. NEW ZEALAND MEDICAL JOURNAL 130(1459): 79-81.

• Te Morenga L., Docherty P., Williams S. and Mann J. (2017) The effect of a diet moderately high in protein and fiber on insulin sensitivity measured using the dynamic insulin sensitivity and secretion test (DISST). Nutrients 9(12) http://dx.doi.org/10.3390/nu9121291.

• Damanhuri NS., Chiew YS., Othman NA., Docherty PD., Pretty CG., Shaw GM., Desaive T. and Chase JG. (2016) Assessing respiratory mechanics using pressure reconstruction method in mechanically ventilated spontaneous breathing patient. Computer Methods and Programs in Biomedicine 130: 175-185. http://dx.doi.org/10.1016/j.cmpb.2016.03.025.

• Fisk L., Docherty PD., Pretty C. and Chase JG. (2016) Incorporating bolus and infusion pharmacokinetics into the ICING insulin model. Mathematical Biosciences 281: 1-8. http://dx.doi.org/10.1016/j.mbs.2016.08.005.

• Gray RAL., Docherty PD., Fisk LM. and Murray R. (2016) A modified approach to objective surface generation within the Gauss-Newton parameter identification to ignore outlier data points. Biomedical Signal Processing and Control 30: 162-169. http://dx.doi.org/10.1016/j.bspc.2016.06.009.

• Huetter L., Geoghegan PH., Docherty PD., Lazarjan MS., Clucas D. and Jermy MC. (2016) Fabrication of a compliant phantom of the human aortic arch for use in Particle Image Velocimetry (PIV) experimentation. Current Directions in Biomedical Engineering 2(1): 493-497. http://dx.doi.org/10.1515/cdbme-2016-0109.

• Langdon R., Docherty PD., Chiew YS., Möller K. and Chase JG. (2016) Use of basis functions within a non-linear autoregressive model of pulmonary mechanics. Biomedical Signal Processing and Control 27: 44-50. http://dx.doi.org/10.1016/j.bspc.2016.01.010.

• Laufer B., Docherty PD., Knörzer A., Chiew YS., Langdon R., Moller K. and Chase JG. (2016) Performance of variations of the dynamic elastance model in lung mechanics. Control Engineering Practice (early access online) http://dx.doi.org/10.1016/j.conengprac.2016.03.004.

• Pironet A., Dauby PC., Chase JG., Docherty PD., Revie J. and Desaive T. (2016) Structural identifiability analysis of a cardiovascular system model. Medical Engineering and Physics 38(5): 433-441. http://dx.doi.org/10.1016/j.medengphy.2016.02.005.

• Chiew YS., Pretty C., Docherty PD., Lambermont B., Shaw GM., Desaive T. and Chase JG. (2015) Time-varying respiratory system elastance: A physiological model for patients who are spontaneously breathing. PLoS ONE 10(1) http://dx.doi.org/10.1371/journal.pone.0114847.

• Jamaludin UK., Docherty PD., Chase JG. and Shaw GM. (2015) Impact of Haemodialysis on Insulin Kinetics of Acute Kidney Injury Patients in Critical Care. Journal of Medical and Biological Engineering 35(1): 125-133. http://dx.doi.org/10.1007/s40846-015-0015-x.

• Mansell EJ., Docherty PD., Fisk LM. and Chase JG. (2015) Estimation of secondary effect parameters in glycaemic dynamics using accumulating data from a virtual type 1 diabetic patient. Mathematical Biosciences 266: 108-117. http://dx.doi.org/10.1016/j.mbs.2015.06.002.

• Othman NA., Docherty PD., Krebs JD., Bell DA. and Chase JG. (2015) The necessity of identifying the basal glucose set-point in the IVGTT for patients with Type 2 Diabetes. BioMedical Engineering OnLine 14(1): 10pp. http://dx.doi.org/10.1186/s12938-015-0015-7.

• Petrov AY., Docherty PD., Sellier M. and Chase JG. (2015) Multi-frequency Rayleigh damped elastography: in silico studies. Medical Engineering and Physics 37(1): 55-67. http://dx.doi.org/10.1016/j.medengphy.2014.10.007.

• Pironet A., Docherty PD., Dauby PC., Chase JG. and Desaive T. (2015) Practical identifiability analysis of a minimal cardiovascular system model. Computer Methods and Programs in Biomedicine http://dx.doi.org/10.1016/j.cmpb.2017.01.005.

• Damanhuri NS., Docherty PD., Chiew YS., van Drunen EJ., Desaive T. and Chase JG. (2014) A Patient-Specific Airway Branching Model for Mechanically Ventilated Patients. Computational and Mathematical Methods in Medicine 2014: 645732. http://dx.doi.org/10.1155/2014/645732.

• Davidson SM., Docherty PD. and Chase JG. (2014) Use of the DISST Model to Estimate the HOMA and Matsuda Indexes Using Only a Basal Insulin Assay. Journal of Diabetes Science and Technology 8(4): 815-820. http://dx.doi.org/10.1177/1932296814532490.

• Docherty PD. and Chase JG. (2014) An in-silico proof-of-concept investigation of a combined glucose-insulin bolus quick dynamic insulin sensitivity test. Biomedical Signal Processing and Control 10: 332-337. http://dx.doi.org/10.1016/j.bspc.2012.12.002.

• Docherty PD., Chase JG., Te Morenga L. and Fisk LM. (2014) A novel hierarchal-based approach to measure insulin sensitivity and secretion in at-risk populations. Journal of Diabetes Science and Technology 8(4): 807-814. http://dx.doi.org/10.1177/1932296814536511.

• Docherty PD., Schranz C., Chase JG., Chiew YS. and Möller K. (2014) Utility of a novel error-stepping method to improve gradient-based parameter identification by increasing the smoothness of the local objective surface: A case study of pulmonary mechanics. Computer Methods and Programs in Biomedicine 114(3): e70-e78. http://dx.doi.org/10.1016/j.cmpb.2013.06.017.

• Docherty PD., Schranz C., Chiew YS., Möller K. and Chase JG. (2014) Reformulation of the pressure-dependent recruitment model (PRM) of respiratory mechanics. Biomedical Signal Processing and Control 12: 47-53. http://dx.doi.org/10.1016/j.bspc.2013.12.001.

• Kamoi S., Pretty CG., Docherty PD., Squire D., Revie JA., Chiew YS., Desaive T., Shaw GM. and Chase JG. (2014) Continuous stroke volume estimation from aortic pressure using zero dimensional cardiovascular model: proof of concept study from porcine experiments. PLOS ONE 9(7) e102476 http://dx.doi.org/10.1371/journal.pone.0102476.

• Petrov AY., Docherty PD., Sellier M. and Chase JC. (2014) Multi-frequency inversion in Rayleigh damped Magnetic Resonance Elastography. Biomedical Signal Processing and Control 13: 270-281. http://dx.doi.org/10.1016/j.bspc.2014.04.006.

• Petrov AY., Sellier M., Docherty PD. and Chase JG. (2014) Parametric-based brain Magnetic Resonance Elastography using a Rayleigh damping material model. Computer Methods and Programs in Biomedicine 116(3): 328-339. http://dx.doi.org/10.1016/j.cmpb.2014.05.006.

• Pironet A., Dauby PC., Chase JG., Revie JA., Docherty PD. and Desaive T. (2014) Structural identifiability analysis of a cardiovascular system model. IFAC Proceedings Volumes (IFAC-PapersOnline) 19: 3869-3874. http://dx.doi.org/10.3182/20140824-6-za-1003.00549.

• Docherty PD., Berkeley JE., Lotz TF., Te Morenaga L., Shaw GM., McAuley KA., Mann JI. and Chase JG. (2013) Clinical validation of the quick dynamic insulin sensitivity test. IEEE tranactions on Biomedical Engineering 60(5): 1266-1272. http://dx.doi.org/10.1109/TBME.2012.2232667.

• Krebs JD., Bell D., Hall R., Parry-Strong A., Docherty PD., Clarke K. and Chase JG. (2013) Improvements in glucose metabolism and insulin sensitivity with a low-carbohydrate diet in obese patients with type 2 diabetes. Journal of the American College of Nutrition 32(1): 11-17. http://dx.doi.org/10.1080/07315724.2013.767630.

• Petrov A., Chase JG., Sellier M. and Docherty PD. (2013) Non-identifiability of the Rayleigh damping material model in magnetic resonance elastography. Mathematical Biosciences 246(1): 191-201. http://dx.doi.org/10.1016/j.mbs.2013.08.012.

• Docherty PD., Chase JG. and David T. (2012) Characterisation of the iterative integral parameter identification method. Medical and Biological Engineering and Computing 50(2): 127-134. http://dx.doi.org/10.1007/s11517-011-0851-y.

• Jamaludin UK., Docherty PD., Chase JG., Le Compte AJ., Shaw GM., Desaive T. and Preiser JC. (2012) Observation of incretin effects during enteral feed transitions of critically ill patients. e-SPEN Journal 74(4): e154-e159. http://dx.doi.org/10.1016/j.clnme.2012.05.002.

• Schranz C., Docherty PD., Chiew YS., Chase JG. and Moeller K. (2012) Structural identifiability and practical applicability of an alveolar recruitment model for ARDS patients. IEEE Transactions on Biomedical Engineering 59(12): 3396-3404. http://dx.doi.org/10.1109/TBME.2012.2216526.

• Schranz C., Docherty PD., Chiew YS., Möller K. and Chase JG. (2012) Iterative Integral Parameter Identification of a Respiratory Mechanics Model. BioMedical Engineering OnLine 11(38) http://dx.doi.org/10.1186/1475-925X-11-38.

• Docherty PD., Chase JG., Lotz TF. and Desaive T. (2011) A graphical method for practical and informative identifiability analyses of physiological models: A case study of insulin kinetics and sensitivity. BioMedical Engineering OnLine 10(39): 20pp. http://dx.doi.org/10.1186/1475-925X-10-39.

• Docherty PD., Chase JG., Lotz TF., Hann CE., Shaw GM., Berkeley JE., TeMorenaga L., Mann JI. and McAuley K. (2011) Independent cohort cross-validation of the real-time DISTq estimation of insulin sensitivity. Computer Methods and Programs in Biomedicine 102(2): 94-104. http://dx.doi.org/10.1016/j.cmpb.2010.08.002.

• Docherty PD., Chase JG., Te Morenaga L., Lotz TF., Berkeley JE., Shaw GM., McAuley KA. and Mann JI. (2011) A spectrum of dynamic insulin sensitivity test protocols. Journal of Diabetes Science and Technology (JoDST) 5(6): 1499-1508.

• Lin J., Razak NN., Pretty CG., Le Compte AJ., Docherty PD., Parente JD., Shaw GM., Hann CE. and Chase JG. (2011) A physiological Intensive Control Insulin-Nutrition-Glucose (ICING) model validated in critically ill patients. Computer Methods and Programs in Biomedicine 102(2): 192-205. http://dx.doi.org/10.1016/j.cmpb.2010.12.008.

• McAuley KA., Berkeley JE., Docherty PD., Lotz TF., Te Morenaga LA., Shaw GM., Williams SM., Chase JG. and Mann JI. (2011) The Dynamic Insulin Sensitivity and Secretion Test - a novel measure of insulin sensitivity. Metabolism 60(12): 1748-1756. http://dx.doi.org/10.1016/j.metabol.2011.05.009.

• Chase JG., Mayntzhusen K., Docherty PD., Andreassen S., McAuley KA., Lotz TF. and Hann CE. (2010) A three-compartment model of the C-peptide-insulin dynamic during the DIST test. Mathematical Biosciences 228(2): 136-146. http://dx.doi.org/10.1016/j.mbs.2010.09.001.

• Docherty PD., Chase JG., Hann CE., Lotz TF., Lin J., McAuley KA. and Shaw GM. (2010) The identification of insulin saturation effects during the Dynamic Insulin Sensitivity Test. The Open Medical Informatics Journal 4: 141-148. http://dx.doi.org/10.2174/1874431101004010141.

• Hann CE., Docherty P., Chase JG. and Shaw GM. (2010) A fast generalizable solution method for glucose control algorithms. Mathematical Biosciences 227(1): 44-55. http://dx.doi.org/10.1016/j.mbs.2010.06.001.

• Lotz TF., Chase JG., McAuley KA., Shaw GM., Docherty PD., Berkeley JE., Williams SM., Hann CE. and Mann JI. (2010) Design and clinical pilot testing of the model-based Dynamic Insulin Sensitivity and Secretion Test (DISST). Journal of Diabetes Science and Technology 4(6): 1408-1423.

• Docherty PD., Chase JG., Lotz T., Hann CE., Shaw GM., Berkeley J., Mann JI. and McAuley KA. (2009) DISTq: An Iterative Analysis of Glucose Data for Low-Cost, Real-Time and Accurate Estimation of Insulin Sensitivity. The Open Medical Informatics Journal 3: 65-76. http://dx.doi.org/10.2174/1874431100903010065.

• Lotz T., Göltenbolt U., Chase JG., Docherty PD. and Hann CE. (2009) A minimal C-peptide sampling method to capture peak and total prehepatic inuslin secretion in model based experimental insulin sensitivity studies. Journal of diabetes science and technology 3(4): 875-886.

• Lotz T., Göltenbott U., Chase JG., Docherty PD. and Hann CE. (2009) A Minimal C-Peptide Sampling Method to Capture Peak and Total Pre-Hepatic Insulin Secretion in Model-Based Experimental Insulin Sensitivity Studies. Journal of Diabetes Science and Technology 3(4): 875-886.

Conference Contributions - Published

• Abdulbaki Alshirbaji T., Aldeen Jalal N., Docherty PD., Neumuth T. and Moeller K. (2022) Neural Network Classification of Surgical Tools in Gynecological Videos. In Current Directions in Biomedical Engineering 8(2): 644-647. http://dx.doi.org/10.1515/cdbme-2022-1164.

• Alshirbaji TA., Jalal NA., Docherty PD., Neumuth PT. and Moller K. (2022) Improving the Generalisability of Deep CNNs by Combining Multi-stage Features for Surgical Tool Classification. In Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS 2022-July: 533-536. http://dx.doi.org/10.1109/EMBC48229.2022.9870883.

• Laufer B., Docherty PD., Jalal NA., Krueger-Ziolek S., Hoeflinger F., Reindl L. and Moeller K. (2022) Tiffeneau-Testing by means of a Smart-Shirt. In Current Directions in Biomedical Engineering 8(2): 616-619. http://dx.doi.org/10.1515/cdbme-2022-1157.

• Abdulbaki Alshirbaji T., Jalal NA., Docherty PD., Neumuth T. and Möller K. (2021) Cross-dataset evaluation of a CNN-based approach for surgical tool detection. In.

• Jalal NA., Alshirbaji TA., Docherty PD., Neumuth T. and Moeller K. (2021) A deep learning framework for recognising surgical phases in laparoscopic videos. In IFAC-PapersOnLine 54(15): 334-339. http://dx.doi.org/10.1016/j.ifacol.2021.10.278.

• Wilkie J., Docherty PD. and Möller K. (2021) Stripping torque model for bone screws. In IFAC-PapersOnLine 54(15): 442-447. http://dx.doi.org/10.1016/j.ifacol.2021.10.296.

• Laufer B., Krueger-Ziolek S., Docherty PD., Hoeflinger F., Reindl L. and Moeller K. (2020) An alternative way to measure respiration induced changes of circumferences: A pilot study. In Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS 2020-July: 4632-4635. http://dx.doi.org/10.1109/EMBC44109.2020.9175578.

• Lilley R., Reynaud A., Docherty PD., Smith N. and Kabaliuk N. (2020) Rheological Experimentation to Investigate History Dependent Viscoelastic Properties of ex-vivo Ovine Brain Tissue. In IFAC-PapersOnLine 53(2): 16275-16280. http://dx.doi.org/10.1016/j.ifacol.2020.12.623.

• Smith N., Wright F., Docherty PD., Lilley R. and Kabaliuk N. (2020) An In-silico Simulation of Pressure Wave Excursions after Impact to the Frontal Lobe of a Homogenous Model of the Brain. In IFAC-PapersOnLine 53(2): 16281-16285. http://dx.doi.org/10.1016/j.ifacol.2020.12.624.

• Laufer B., Krueger-Ziolek S., Docherty PD., Hoeflinger F., Reindl L. and Moeller K. (2019) Tidal volume via circumferences of the upper body: A pilot study. In Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS: 3559-3562. http://dx.doi.org/10.1109/EMBC.2019.8857688.

• Williamson P., Docherty P., Yazdi S., Jermy M., Khanafer A., Kabaliuk N. and Geoghegan P. (2019) PIV Analysis of Stented Haemodynamics in the Descending Aorta. In Dossel O (Eds). EMBC 2019 Proceedings: 4737-4740. http://dx.doi.org/10.1109/EMBC.2019.8856823.

• Morton SE., Dickson JL., Chase JG., Docherty PD., Howe SL., Shaw GM. and Tawhai M. (2018) Basis function identification of lung mechanics in mechanical ventilation for predicting outcomes of therapy changes: A first virtual patient. In IFAC-PapersOnLine 51(15): 299-304. IFAC Secretariat. http://dx.doi.org/10.1016/j.ifacol.2018.09.151.

• Morton SE., Docherty PD., Dickson JL. and Chase G. (2018) An analysis of the impact of the inclusion of expiration data on the fitting of a predictive pulmonary elastance model. In Biomedical Engineering / Biomedizinische Technik 63(s1): S189-S189. De Gruyter. http://dx.doi.org/10.1515/bmt-2018-6036.

• Yazdi S., Docherty P., Khanafer A., Jermy M., Geoghegan P., Kabaliuk N. and Williamson P. (2018) The flow field in compliant and rigid models of the human aortic arch. In LXLASER2018 Proceedings: 13.

• Allison SJ., Docherty PD., Pons D. and Chase JG. (2017) A Bootstrap Approach for Predicting Methoxyflurane Occupational Exposure in Paramedicine. In IFAC-PapersOnLine 50(1): 6666-6671. http://dx.doi.org/10.1016/j.ifacol.2017.08.1158.

• Argus FJ., Sutherland CJ., Chakson J., McNearney E., Dickson JL., Redmond D., Kim K., Docherty PD. and Chase JG. (2017) Predicting the Effects of Changing PEEP Using a Basis Function Method. In IFAC-PapersOnLine.

• Chakson J., McNearney E., Argus FJ., Sutherland CJ., Dickson JL., Redmond D., Kim K., Docherty PD. and Chase JG. (2017) Analysis of Neonatal Pulmonary Mechanics. In.

• Damanhuri NS., Chiew YS., Docherty PD., Othman NA., Shaw GM., Desaive T. and Chase JG. (2017) Negative Lung Elastance in Mechanically Ventilated Spontaneously Breathing Patient. In Dochain D (Eds). IFAC papers online 50 Elsevier.

• Kretschmer J., Docherty PD., Laufer B. and Moeller K. (2017) The effect of measurement error on the hierarchical identification of a gas exchange model. In Denis Dochain, Didier Henrion, Dimitri Peaucelle (Eds). 50(1): 15145-15150-15150. http://dx.doi.org/10.1016/j.ifacol.2017.08.2254.

• Langdon R., Docherty PD. and Chase JG. (2017) Basis Function Modelling of Respiratory Patients with High or Low Auto-PEEP. In Dochain D; Henrion D; Peaucelle D (Eds). IFAC Proceedings Volumes (IFAC-PapersOnline) 50(1): 15121-15121. Elsevier. http://dx.doi.org/10.1016/j.ifacol.2017.08.2246.

• Langdon R., Docherty PD., Schranz C. and Chase JG. (2017) Plateau Pressure Prediction in ARDS Patients. In IFAC-PapersOnLine 50(1): 5480-5485. http://dx.doi.org/10.1016/j.ifacol.2017.08.1086.

• Chiew YS., Docherty PD., Redmond D., Moltchanova E., Scarrott C., Pretty CG. and Chase JG. (2016) Stopping a Clinical Trial: Simulation-based design of a robust stopping rule using difference in interventional effect on mortality. In : 6. IEEE.

• Chiew YS., Shaw GM., Docherty P., Dickson J., Pretty C. and Chase JG. (2016) Early clinical trial termination: Simulation-based design of a robust stopping rule using difference in interventional effect on mortality. In IECBES 2016 - IEEE-EMBS Conference on Biomedical Engineering and Sciences: 484-489. http://dx.doi.org/10.1109/IECBES.2016.7843498.

• Geoghegan PH., Docherty PD. and Jermy MC. (2016) Understanding Arterial Pressure from PIV data. In.

• Kretschmer J., Docherty PD., Riedlinger A. and Moeller K. (2016) Evaluating different approaches to identify a three parameter gas exchange model. In.

• Langdon R., Docherty PD. and Moeller K. (2016) Inspiratory and Expiratory Elastance in a Non-Linear Autoregressive Model of Pulmonary Mechanics. In.

• Langdon R., Docherty PD., Laufer B. and Moeller K. (2016) Resistance in a Non-Linear Autoregressive Model of Pulmonary Mechanics. In.

• Mansell E., Langdon R., Docherty PD., Schmidt S., Madsen H., Bagterp-Jørgensen J. and Chase JG. (2016) Use of non-linear autoregressive correlation to define insulin kinetics and glucose dynamics during subcutaneous aspart infusion in type 1 diabetes. In Brosnahan J (Eds).

• Huetter L., Geoghegan PH., Docherty PD., Lazarjan MS., Clucas D. and Jermy MC. (2015) Application of a meta-analysis of aortic geometry to the generation of a compliant phantom for use in particle image velocimetry experimentation. In Proceedings of the 9th IFAC Symposium on Biological and Medical Systems: 6pp.

• Langdon R., Docherty PD., Chiew YS., Damanhuri NS. and Chase JG. (2015) Implementation of a Non-Linear Autoregressive Model with Modified Gauss-Newton Parameter Identification to Determine Pulmonary Mechanics of Respiratory Patients that are Intermittently Resisting Ventilator Flow Patterns. In Proceedings: 6pp.

• Laufer B., Docherty PD., Chiew YS., Moeller K. and Chase JG. (2015) Identifying pressure dependent elastance in lung mechanics with reduced influence of unmodelled effects. In Proceedings: 6pp.

• Mansell EJ., Docherty PD. and Chase JG. (2015) The precision of identified variables with respect to multivariable set size in glycaemic data from a virtual type 1 diabetic patient. In Proceedings: 6pp.

• Mansell EJ., Docherty PD., Chase JG. and Benyo B. (2015) An eigen-analysis of the relationships between model structure, discrete data, measurement error and resulting parameter identification distributions. In Proceedings of the 9th IFAC Symposium on Biological and Medical Systems: 6pp.

• Pironet A., Desaive T., Dauby PC., Chase JG. and Docherty PD. (2015) Parameter Identification Methods in a Model of the Cardiovascular System. In IFAC-PapersOnLine 48(20): 366-371.

• Redmond DP., Docherty PD., Chiew YS. and Chase JG. (2015) A Polynomial Model of Patient-specific Breathing Effort During Controlled Mechanical Ventilation. In Proccedings of the 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society: 4pp.

• Davidson SM., Docherty PD. and Allison PA. (2014) The Regional Conjugate Optimisation Approach: A Novel Method for Three Parameter Identification of Physiological Models. In.

• Poole S., Chiew YS., Redmond DP., Davidson SM., Damanhuri NS., Pretty CG., Docherty PD., Desaive T., Shaw GM. and Chase JG. (2014) Real-time Breath to Breath Asynchrony Event Detection using Time-Varying Respiratory Elastance Model. In.

• Jamaludin U., Docherty PD., Chase JG. and Shaw GM. (2013) Impact of hemodialysis on insulin sensitivity of acute reanl failure (ARF) patients with sepsis in critical care. In.

• Docherty PD. and Chase JG. (2012) Improving minimal model identifiability in insulin resistant patients utilising insight from the graphical model identifiabilty method. In Proceedigns of the 8th IFAC symposium on Biological and Medical Systems (BMS12) 2012.

• Docherty PD., Schranz C., Chase JG., Chiew YS. and Moeller K. (2012) Traversing the Fuzzy Valley: Problems caused by reliance on default simulation and parameter identification programs for discontinuous models. In Biological and Medical Systems 8(1): 490-494. http://dx.doi.org/10.3182/20120829-3-HU-2029.00033.

• Jamaludin UK., Docherty PD., Chase JG., Le Compte AJ. and Shaw GM. (2012) Observation of changes in model-based insulin sensitivity during haemodialysis transitions for critically ill patients. In Biological and Medical Systems 8(1): 349-354. http://dx.doi.org/10.3182/20120829-3-HU-2029.00021.

• Othman NA., Docherty P., Jamaludin UK. and Chase G. (2012) Clinical evaluation and interpretation of a proportional-derivative control model for endogenous insulin secretion response to glucose. In 2012 IEEE-EMBS Conference on Biomedical Engineering and Sciences, IECBES 2012: 316-320. http://dx.doi.org/10.1109/IECBES.2012.6498161.

• Schranz C., Docherty PD., Chiew YS., Moeller K. and Chase JG. (2012) Identifiability analysis of a pressure-depending alveolar recruitment model. In Biological and Medical Systems 8(1): 137-142. http://dx.doi.org/10.3182/20120829-3-HU-2029.00015.

• Schranz C., Docherty PD., Moeller K. and Chase JG. (2012) Integral-Based Identification of an Inhomogeneity Model in Respiratory Mechanics. In.

• Schranz C., Moller K., Docherty PD., Chiew YS. and Chase JG. (2012) Identifizierbarkeit und Parameter Identifizierung in einem alveolaren Rekrutierungsmodell für die Atemmechanik. In.

• Docherty PD., Chase JG., Lotz T. and Krebs JD. (2011) Evaluation of a Glomerular Filtration Term in the DISST Model to Capture the Glucose Pharmacodynamics of an Insulin-Resistant Cohort. In : 6pp. http://dx.doi.org/10.3182/20110828-6-IT-1002.01691.

• Docherty PD., Chase JG., Lotz T., Berkeley J. and Shaw GM. (2011) An in-silico Analysis of the Ability of Dynamic Tests to Trace the Kinetic Behaviour of Insulin Sensitizer Drugs. In : 6pp. http://dx.doi.org/10.3182/20110828-6-IT-1002.01687.

• Docherty PD., Chase JG., Lotz TF., Hann CE., TeMorenga L., McAuley KA., Shaw GM., Berkeley JE. and Mann JI. (2010) Evaluation of the Performances and Costs of a Spectrum of Dynamic Insulin Sensitivity Test Protocols. In IET Seminar Digest 2010(4): 283-288. http://dx.doi.org/10.1049/ic.2010.0295.

• Geoghegan PH., Buchmann NA., Jermy MC., Nobes D., Spence CJT. and Docherty PD. (2010) SPIV and image correlation measurements of surface displacement during pulsatile flow in models of compliant, stenosed arteries. In Proceedings.

• Docherty PD., Chase JG., Lotz TF., Hann CE., Shaw GM., Berkeley JE., Mann JI. and McAuley K. (2009) DISTq: Low-cost, accurate and real-time estimation of insulin sensitivity. In Proceedings of the 7th IFAC Symposium on Modelling and Control in Biomedical Systems: 91-96.

Conference Contributions - Other

• Barr CJS., Docherty PD., Raajesekar S. and Gieseg S. (2022) Shear stress induced low-density lipoprotein aggregation: The effect of shear stress on atherosclerosis. Auckland, New Zealand: Fluids in New Zealand Conference, 27-27 Jan 2022.

• Scott N., Docherty P., Williamson P., Sellier M. and Steven B. (2022) A novel method for Navier-Stokes Identification and Correction of Erroneous Particle Image Velocimetry Data. Auckland: Fluids in New Zealand, 27 Jan 2022.

• Zwirner J., Devananthan P., Ondrushka B., Docherty P. and Kabaliuk N. (2022) The value of ‘Forensic tissue mechanics’ for time since death estimations – a proof of concept. Lugano, Switzerland: 101st International Annual Meeting of the German society of forensic medicine (Jahrestagung DGRM 2022), 1 Jan 2022.

• Jalal NA., Abdulbaki Alshirbaji T., Laufer B., Docherty PD., Neumuth T. and Möller K. (2021) Correlation between intra-abdominal pressure and lung mechanics during laparoscopic gynecology. Basel, Switzerland: 15th Interdisciplinary Symposium AUTOMED 2021 - Automation in Medical Engineering, 8-9 Jun 2021.

• Laufer B., Krueger-Ziolek S., Docherty PD., Hoeflinger F., Reindl L. and Moeller K. (2021) An Alternative Way to Measure Tidal Volumes. .

• Wilkie JA., Docherty PD. and Möller K. (2021) Data quantity requirements for bone material property identification. Basel, Switzerland: 15th Interdisciplinary Symposium AUTOMED 2021 - Automation in Medical Engineering, 8-9 Jun 2021.

• Wilkie JA., Docherty PD. and Möller K. (2021) Speed-torque relationship for self-tapping bone screw insertion. 15th Interdisciplinary Symposium AUTOMED 2021 - Automation in Medical Engineering, 8-9 Jun 2021.

• Docherty PD., Lerios T., Laufer B., Chase G. and Moeller K. (2020) A method for observing ongoing patient respiratory behaviour with the NARX model. Paris, France: Virtual Physiological Human 2020 (VPH 2020), 24-28 Aug 2020.

• Laufer B., Docherty PD., Krüger-Ziolek S., Höflinger F., Reindl L. and Möller K. (2020) Neue Methode zur Bestimmung atembasierter Umfangsänderungen. Lübeck, Deutschland: Automatisierungstechnische Verfahren für die Medizin AUTOMED, 2-3 Mar 2020.

• Laufer B., Murray R., Docherty PD., Krüger-Ziolek S., Höflinger F., Reindl L. and Möller K. (2020) Anzahl und Position von Sensoren in einem Smart-Shirt zur Bestimmung von Tidalvolumina. Lübeck, Deutschland: Automatisierungstechnische Verfahren für die Medizin AUTOMED, 2-3 Mar 2020.

• Wilkie JA., Docherty PD. and Möller K. (2020) Modellansatz zur Kontrolle des Einschraubvorgangs in Knochengewebe. Lübeck, Deutschland: Automatisierungstechnische Verfahren für die Medizin AUTOMED, 2-3 Mar 2020.

• Docherty P., Sellier M., Geoghegan P., Yazdi S., Williamson P., Khanafer A., Kabaliuk N. and Jermy M. (2019) Integral-based reconstruction of static pressure in a compliant axisymmetric vessel using velocity field data from particle image velocimetry (PIV) analysis. Dunedin, NZ: 7th Fluids in New Zealand meeting, 31 Jan-1 Feb 2019.

• Jermy M., Williamson P., Docherty P., Yazdi S., Kabaliuk N., Khanafer A. and Geoghegan P. (2019) In-Vitro PIV Analysis of Pulsatile Flow Distal of a Frozen Elephant Trunk Stent Phantom. Christchurch, New Zealand: 1st International Conference of Thermal Fluid Dynamics and Control and the 2nd International Symposium of Combustion Instability and Control, 2-6 Aug 2019.

• Lerios T., Docherty PD., Moeller K. and Chase G. (2019) Determining changes in patient respiratory mechanics using non-linear autoregressive models of pulmonary elastance. Dunedin, NZ: Fluids in New Zealand Conference (FiNZ 2019), 31 Jan-1 Feb 2019.

• Yazdi S., Geoghegan P., Jermy M., Khanafer A. and Docherty P. (2019) In-vitro measurement of hemodynamics in rigid and compliant silicone replicas of aortic arch using stereoscopic particle image velocimetry. Dunedin, NZ: 7th Fluids in New Zealand meeting, 31 Jan-1 Feb 2019.

• Argus F., Sutherland C., McNearney E., Chakson J., Dickson J., Redmond D., Kim K-T., Docherty PD. and Chase J. (2018) Predicting the Effects of Changing PEEP Using a Basis Function Method. Toulouse, France: 20th IFAC World Congress, 9-14 Jul 2018.

• Docherty PD., Chase G., Fox WH. and Naswall K. (2018) Where do New Zealand Female Engineers come from? Insights from a quantitative analysis. Hamilton, NZ: 29th Australasian Association for Engineering Education Conference, 9-12 Dec 2018.

• Geoghegan P., Yazdi S., Docherty P. and Jermy M. (2018) Understanding Arterial Disease through Particle Image Velocimetry. Johannesburg, South Africa: 1st UNISA International Symposium of Biomechanics in Bio-Fluids and Soft Tissue Mechanics, 3-3 Apr 2018.

• Laufer B., Krueger-Ziolek S., Docherty PD., Hoeflinger F., Reindl L. and Moeller K. (2018) Minimum number of sensors for tidal volume measurements with a compression shirt. Prague, Czech Republic: World Congress on Medical Physics & Biomedical Engineering (IUPESM 2018), 3-8 Jun 2018.

• Yazdi S., Docherty P., Jermy M. and Geoghegan P. (2018) Stereo-PIV measurement of aortic arch hemodynamics in rigid and compliant phantoms. Auckland, NZ: Fluids in New Zealand, 8-9 Feb 2018.

• Blane G., Geoghegan PH., Docherty PD. and Yazdi SG. (2017) Investigation and development of anisotropic materials for use in patient-specific phantoms to mimic the material properties of the arterial wall. Christchurch, New Zealand: Fluids in New Zealand (FiNZ), 10 Feb 2017.

• Docherty P., Fox-Turnbull W. and Zaka P. (2017) Development of a flipped classroom approach for teaching foundational engineering dynamics. Christchurch, New Zealand: Technology Education New Zealand (TENZ) conference and the 12th biannual International Conference on Technology Education (ICTE), 8-11 Oct 2017.

• Frewen T., McDonald I. and Docherty P. (2017) Development of a portable milking platform for ovine dairy. Palmerston North, New Zealand: Sheep Milk NZ Conference, 13-14 Mar 2017.

• Laufer B., Kretschmer J., Docherty PD., Möller K., Höflinger F. and Reindl L. (2017) Sensor placement in a smart compression shirt to measure spontaneous breathing. Biomedical Engineering / Biomedizinische Technik, 1 Jan 2017.

• Morton S., Dickson J., Docherty PD., Shaw G. and Chase JG. (2017) Development of a Predictive Model for Pulmonary Elastance. Christchurch, New Zealand: Heath Research Society of Canterbury Grand Rounds, 4-4 Mar 2017.

• Morton SE., Dickson JL., Docherty PD., Shaw G. and Chase JG. (2017) Development of Virtual Patients for use in Mechanical Ventilation. Auckland, NZ: Medtech CoRE Conference, 20 Jun 2017.

• Yazdi SG., Geoghegan PH. and Docherty PD. (2017) In-silico modeling of aortic arch hemodynamics for surgical implant testing. Christchurch, New Zealand: Fluids in New Zealand (FiNZ), 10 Feb 2017.

• Bibiano C., Chiew YS., Redmond D., Kretschmer J., Docherty PD., Chase JG. and Moeller K. (2016) Effects of different models and different respiratory maneouvres in respiratory mechanics estimation. Paphos, Cyprus: XIV Mediterranian Conference on Medical and Biological Engineeering and Computing, 31 Mar-2 Apr 2016.

• Blane G., Gibb NE., Lim SG-S., Gillard WR., Docherty PD., White D., Langdon R., Allison S., Hyndman J. and Geoghegan PH. (2016) Preventing lung damage via automation and optimisation of mechanical ventilation for critically ill patients in the third world. Christchurch, New Zealand: Health Research Society of Canterbury: Christchurch Hospitals' Grand Rounds series 2016, 20-20 May 2016.

• Chiew YS., Docherty PD., Dickson JL., Moltchanova E., Scarrott C., Pretty CG., Shaw GM. and Chase JG. (2016) Simulation-Based Design Of A Robust Stopping Rule To Ensure Patient Safety. Brussels, Belgium: 36th International Symposium on Intensive Care and Emergency Medicine (ISICEM), 15-18 Mar 2016.

• Docherty PD., Zaka P. and Fox-Turnbull WH. (2016) Instructor impressions of a flipped classroom environment for foundational engineering dynamics. Hamilton, New Zealand: Distance Education Association of New Zealand Conference (DEANZ), 17-20 Apr 2016.

• Geoghegan P., Docherty P. and Jermy M. (2016) Getting to the heart of the problem. Auckland, New Zealand: Fluids in New Zealand, 26-27 Jan 2016.

• Goodman M., David T., Docherty PD. and Murray R. (2016) Calcium Dynamics in Coupled Cellular Reaction Diffusion Equations. Queenstown, New Zealand: 34th Australasian Winter Conference on Brain Research, 27-31 Aug 2016.

• Goodman M., David T., Docherty PD. and Murray R. (2016) Homogenisation Theory Applied to Coupled Mammalian Cells. Christchurch, New Zealand: Health Research Society of Canterbury: Christchurch Hospitals' Grand Rounds series 2016, 27-27 May 2016.

• Goodman M., Murray R., Docherty PD. and David T. (2016) Homogenisation Theory with Coupled Cellular Reaction Diffusion Equations. Boston, MA, USA: SIAM Conference on the Life Sciences 2016, 11-14 Jul 2016.

• Langdon R., Docherty PD. and Blane G. (2016) Analysis of pressure dependent resistance and elastance in high auto-PEEP versus low auto-PEEP patients. Nelson, New Zealand: New Zealand Medical Sciences Congress, 29-31 Aug 2016.

• Laufer B., Kretschmer J., Docherty PD., Chiew YS. and Moeller K. (2016) The influence of airway resistance in the dynamic elastance model. Paphos, Cyprus: XIV Mediterranian Conference on Medical and Biological Engineeering and Computing, 31 Mar-2 Apr 2016.

• Wilson JM., Docherty PD., Stubbs RS., Corley B. and Krebs JD. (2016) Assessment of the Dynamic Insulin Secretion and Sensitivity Test (DISST) in morbidly obese subjects pre and post gastric bypass. Taipei, Taiwan: 11th International Diabetes Federation Western Pacific Region Congress (11th IDF-WPR Congress), 27-30 Oct 2016.

• Damanhuri NS., Chiew YS., Othman A., Docherty PD., Shaw GM. and Chase JG. (2015) A pressure reconstruction method for spontaneous breathing effort monitoring. Brussels, Belgium: 35th International Symposium on Intensive Care and Emergency Medicine (ISICEM), 15-18 Mar 2015.

• Docherty PD., Othman NA., Chase JG., Bell DA. and Krebs JD. (2015) Basal Glucose is just the first measured point... right? Bethesda, MD, USA: 15th Annual Diabetes Technology Meeting, 22-24 Oct 2015.

• Langdon R., Docherty PD. and Blane G. (2015) Basis function modelling of respiratory patients with high or low auto-PEEP. Nelson, New Zealand: New Zealand Medical Sciences Congress, 29-31 Aug 2016.

• Langdon R., Docherty PD., Chiew YS., Moeller K. and Chase JG. (2015) Interpolation within a Recruitment Manoeuvre using a Non-Linear Autoregressive Model of Pulmonary Mechanics. Berlin, Germany: 9th IFAC Symposium on Biological and Medical Systems (BMS 2015), 31 Aug-2 Sep 2015.

• Mansell EJ., Docherty PD. and Chase JG. (2015) The detectability of confounding effects in glycemic diary data from in silico patients with diabetes. Bethesda, MD, USA: 15th Annual Diabetes Technology Meeting, 22-24 Oct 2015.

• Othman NA., Docherty PD., Damanhuri NS. and Chase JG. (2015) A Proportional-Derivative Endogenous Insulin Secretion model with an Adapted Gauss Newton Approach. Berlin, Germany: 9th IFAC Symposium on Biological and Medical Systems (BMS 2015), 31 Aug-2 Sep 2015.

• Chiew YS., Poole S., Redmond DP., Van Drunen EJ., Damanhuri NS., Pretty CG., Docherty PD., Lambermont B., Shaw GM. and Desaive T. (2014) Time-Varying Respiratory Elastance for Spontaneously Breathing Patients. Cape Town, South Africa: 19th World Congress of the International Federation of Automatic Control 2014 (IFAC), 24-29 Aug 2014.

• Damanhuri NS., Docherty PD., Chiew YS., Van Drunen EJ., Othman A., Desaive T. and Chase JG. (2014) Relation of Repiratory System Elastance and Expiratory Time Constant: Are They from the Same Lung? Cape Town, South Africa: 19th World Congress of the International Federation of Automatic Control 2014 (IFAC), 24-29 Aug 2014.

• Docherty PD., Gray RAL. and Mansell EJ. (2014) Reducing the Effect of Outlying Data on the Identification of Insulinaemic Pharmacokinetic Parameters with an Adapted Gauss-Newton Approach. Cape Town, South Africa: 19th World Congress of the International Federation of Automatic Control 2014 (IFAC), 24-29 Aug 2014.

• Fisk LM., Docherty PD., Pretty CG., Dickson JL., Shaw GM. and Chase JG. (2014) Virtual Trials with b-sline Basis Functions and Stochastic Differential Equations. Cape Town, South Africa: 19th World Congress of the International Federation of Automatic Control (IFAC 2014), 20-24 Aug 2014.

• Kamoi S., Squire DT., Revie J., Pretty CG., Docherty PD., Chiew YS., Desaive T., Shaw GM. and Chase JG. (2014) Accuracy of Stroke Volume Estimation via Reservoir Pressure Concept and Three Element Windkessel Model. Cape Town, South Africa: 19th World Congress of the International Federation of Automatic Control 2014 (IFAC), 24-29 Aug 2014.

• Knorzer A., Docherty PD., Chiew YS., Chase JG. and Moller K. (2014) An Extension to the First Order model of Pulmonary Mechanics to Capture a Pressure-dependent Elastance in the Human Lung. Cape Town, South Africa: 19th World Congress of the International Federation of Automatic Control 2014 (IFAC), 24-29 Aug 2014.

• Major V., Corbett S., Upjohn Beatson A., Glassenbury D., Redmond D., Szlávecz Á., Davidson S., Damanhuri NS., Docherty PD. and Chiew YS. (2014) A Pressure Reconstruction Method to Estimate Respiratory Mechanics of Breathing Masked by Spontaneous Breathing Efforts. Christchurch, New Zealand: Grand Round Series of Health Research Society of Canterbury (HRSC), 16-30 Mar 2012.

• Othman A., Docherty PD. and Chase JG. (2014) Determining the relative efficacy of a number of PID and PD models that relate insulin secretion to bolus induced glucose excursions. Cape Town, South Africa: 19th World Congress of the International Federation of Automatic Control 2014 (IFAC), 24-29 Aug 2014.

• Petrov A., Docherty PD., Sellier M. and Chase JG. (2014) Imaging of Rayleigh damping properties of the in vivo brain using parametric Magnetic Resonance Elastography. Cape Town, South Africa: 19th World Congress of the International Federation of Automatic Control 2014 (IFAC), 24-29 Aug 2014.

• Pironet A., Dauby PC., Chase JG., Revie JA., Docherty PD. and Desaive T. (2014) Structural Identifiability Analysis of a Cardiovascular System Model. Cape Town, South Africa: 19th World Congress of the International Federation of Automatic Control 2014 (IFAC), 24-29 Aug 2014.

• Chiew YS., Docherty PD., Pretty CG., Redmond D., Davidson S., Poole S., Van Drunen E., Damanhuri NS., Chase JG. and Shaw GM. (2013) Detecting Ventilation Asynchronies Using Time-Variant Respiratory Mechanics. Hobart, Australia: Australian and New Zealand Intensive Care Society (ANZICS)/Australian College of Critical Care Nurses (ATICN) Intensive Care Annual Scientific Meeting 2013, 17-19 Oct 2013.

• Davidson S., Docherty PD., Chase JG. and Berkeley JE. (2013) Use of the DISST model to predict insulin pharmaco-kinetics during the oral glucose tolerance test and reduce the cost of deriving the Matsuda index. Christchurch, New Zealand: Health Research Society of Canterbury: Christchurch Hospitals' Grand Rounds series 2013, 3-10 May 2013.

• Homlok J., Chase JG., Benyo B. and Kovacs K. (2013) Altered blood glucose dynamics during and after anhepatic phase of liver transplantation: a model-based approach. San Jose, Costa Rica: IEEE 17th International Conference on Intelligent Engineering Systems (INES 2013), 19-21 Jun 2013.

• Kamoi S., Chase JG., Docherty PD. and Desaive T. (2013) Cost-effective hemodynamic monitoring of critically ill patients via model-based analysis of aortic pressure measurements. Christchurch, New Zealand: Health Research Society of Canterbury: Christchurch Hospitals' Grand Rounds series 2013, 3-10 May 2013.

• Redmond D., Davidson S., Laing H., White R., Radzi F., Wang N., Poole S., Fernando R., Williams J. and Badcock L. (2013) Are you managing your mechanical ventilator correctly? A model-based answer to an on-going question. Christchurch, New Zealand: Health Research Society of Canterbury: Christchurch Hospitals' Grand Rounds series, 3-10 May 2013.

• Damanhuri NS., Chiew YS., Docherty PD., Geoghegan PH. and Chase JG. (2012) Respiratory airway resistance monitoring in mechanically ventilated patients. Langkawi, Malaysia: 2012 IEEE EMBS Conference on Biomedical Engineering Sciences (IECEBES 2012), 17-19 Dec 2012.

• Schranz C., Docherty PD., Chiew YS., Chase JG. and Moeller K. (2012) A Time-Continuous Model of Respiratory Mechanics of ARDS Patients. Beijing, China: World Congress on Medical Physics and Biomedical Engineering, 26-31 May 2012.

• Schranz C., Docherty PD., Chiew YS., Moeller K. and Chase JG. (2012) Covariance Analysis for Practical Identifiability of an Alveolar Recruitment Model. Jena, Germany: 46th Annual Conference of the German Society for Biomedical Engineering (DGBMT), 16-19 Sep 2012.

• Docherty PD., Chase JG., Berkeley J., Lotz TF., Fisk LM., McAuley KA. and Mann JI. (2011) Validation and implementation of low-cost dynamic insulin sensitivity tests. San Francisco, CA, USA: 11th Annual Diabetes Technology Meeting (DTM2011), 1 Jan 2011.

• Jamaludin U., Docherty PD., Chase JG., Preiser JC., Desaive T. and Shaw GM. (2011) Observation of the Incretin Effect in Critically Ill patients. San Francisco, CA, USA: 11th Annual Diabetes Technology Meeting (DTM2011), 1 Jan 2011.

• Preiser JC., Jamaludin U., Docherty PD., Chase JG., Le Compte AJ., Shaw GM. and Desaive T. (2011) Enteral nutrition-associated incretin effect in the critically ill. Gothenburg, Sweden: 33rd Excellence in Science, Practice and Education in Nutrition Congress (ESPEN), 3-6 Sep 2011.

• Pretty CG., Docherty PD., Pfeiffer L., Jamaludin U., Shaw GM., Le Compte AJ. and Chase JG. (2011) Endogenous insulin secretion and suppression during and after sepsis in critically ill patients - implications for TGC protocols. Brussels, Belgium: 31st International Symposium on Intensive Care and Emergency Medicine (31st ISICEM), 22-25 Mar 2011.

• Berkeley JE., Docherty PD., Shaw GM., Chase JG., McAuley KA., Hann CE. and Mann JI. (2010) DIST: A Novel Test for Measuring Insulin Sensitivity. Orlando, FL, USA: American Diabetes Association's 70th Scientific Sessions, 25-29 Jun 2010.

• Docherty PD., Chase JG., Lotz TF., Hann CE., TeMorenaga L., McAuley KA., Shaw GM., Berkeley JE. and Mann JI. (2010) Evaluation of the Performances and Costs of a Spectrum of DIST Protocols. Coventry, UK: UKACC International Conference on CONTROL 2010, 7-10 Sep 2010.

• Docherty PD., Chase JG., Lotz TF., TeMorenaga L., Mann JI., McAuley KA., Berkeley JE. and Hann CE. (2010) A comparison between the HOMA and the quick DIST for in-expensive insulin sensitivity identification. Christchurch, New Zealand: Health Research Society of Canterbury Seminar Series, 22-22 Apr 2010.

• Jamaludin U., Lin J., Docherty PD. and Chase JG. (2010) Modelled Insulin Sensitivity and Interstitial Insulin Action from a Pilot Study of Insulin Tolerance Tests. University of Otago, Christchurch, New Zealand: Centre for Bio-Engineering One Day Conference, 10-10 Nov 2010.

• Lin J., Jamaludin U., Docherty PD., Razak NN., Le Compte AJ., Pretty CG., Hann CE., Shaw GM. and Chase JG. (2010) Modeled Insulin Sensitivity and Interstitial Insulin Action from a Pilot Study of Dynamic Insulin Sensitivity Tests. Coventry, UK: UK International Conference on CONTROL 2010, 7-10 Sep 2010.

• Lin J., Razak NN., Pretty CG., Le Compte AJ., Docherty PD., Parente JD., Shaw GM., Hann CE. and Chase JG. (2010) Intensive Control Insulin-Nutrition-Glucose Model Validated in Critically Ill Patients. Coventry, UK: UKACC International Conference on CONTROL 2010, 7-10 Sep 2010.

• Berkeley J., Shaw GM., Chase JG., McAuley KA., Lotz TF., Docherty P. and Mann J. (2009) Validation Study of a Novel Test For Measuring Insulin Sensitivity. Dunedin, New Zealand: 33rd Annual Scientific Meeting of NZSSD, 30 Jun-3 Jul 2009.

• Docherty PD., Chase JG., Lotz T., Hann CE., Shaw GM., Berkeley J., McAuley KA. and Mann JI. (2009) Real-time Accurate Assessment of Insulin Sensitivity. New Orleans, LA, USA: American Diabetes Association (ADA) 69th Scientific Sessions, 5-9 Jun 2009.

• Le Compte AJ., Lynn A., Chase JG., Shaw GM., Pretty CG., Mayntzhusen K., Docherty PD. and Parente J. (2009) Tight Glycemic Control in the Neonatal Intensive Care Unit - Proof of Concept Pilot Trials. New Orleans, LA, USA: American Diabetes Association (ADA) 69th Scientific Sessions, 5-9 Jun 2009.

• Docherty P., Hann CE., Chase JG., McAuley KA., Shaw GM. and Mann JI. (2008) Clinical model-based assessment of insulin sensitivity - Fewer measurements and high resolution. Christchurch, New Zealand: 2008 Engineering & Physical Sciences in Medicine and Australian Biomedical Engineering Conference, 16-20 Nov 2008.

• Hann CE., Chase JG., Shaw GM., Desaive T., Docherty P., Starfinger C., Kok K., Brown RG. and Houghton S. (2008) Mathematical modelling and parameter identification methods in systems. Christchurch, New Zealand: 7th Joint Australia-New Zealand Mathematics Convention, 7-12 Dec 2008.

Reports

• Docherty P., Fox-Turnbull W., Zaka P. and Impey T. (2020) Initial Teacher Education (ITE) students’ perceptions of typical engineers: Assessing potential for bias in the formative career decision years.. In Initial Teacher Education (ITE) students’ perceptions of typical engineers: Assessing potential for bias in the formative career decision years., Commissioned by Ako Aotearoa.

• Docherty PD., Fox-Turnbull W. and Zaka P. (2017) Assessing the effectiveness of a flipped classroom in foundation engineering. In Assessing the effectiveness of a flipped classroom in foundation engineering, Commissioned by Ako Aotearoa.

Chapters

• Jamaludin UK., Docherty PD. and Preiser JC. (2014) Incretin Effects and Enteral Feed Transitions. In Preedy R; Patel VR (Ed.), Diet and Nutrition in Critical Care: 1-14. New York: Springer. http://dx.doi.org/10.1007/978-1-4614-8503-2_157-1.

Other

• Fox-Turnbull W., Docherty P., Moridnejad M. and Cooper J. (2021) Journey into Engineering- influencing factors for young women. Redress 29(2) [Magazine article (peer-reviewed)].

Oral Presentations

• Docherty PD. (2014) Some methods in parameter identification and numerical methods for model based analysis. Villengen Schwenningen, Germany: Special Seminar on UC Numerical Research.

• Docherty PD. (2012) Validation and development of the dynamic insulin sensitivity and secretion test (DISST). University of the Third Age (U3A) Series on Medical Matters.

Theses / Dissertations

• Docherty PD. (2011) Evaluation and Development of the Dynamic Insulin Sensitivity and Secretion Test for Numerous Clincial Applications. Christchurch, New Zealand. University of Canterbury.

Student Supervision

Displaying all items.

Current
• PhD - Abdulbaki-Alshirbaji T: Surgical Tool Classification and Smoke Detection in Laparoscopic Videos
• PhD - Devananthan P: Response of brain tissue to cyclic loading that mimics rTBIs
• PhD - Emanuel R: Neural Network interpretation of crowd sourced descriptions of polycystic ovarian syndrome to elucidate disease heterogeneity
• PhD - Jalal N: Surgical Phase Recognition in Laparoscopic Surgery using Convolutional Neural Network
• PhD - Kyselov P: Automation of non-destructive quality control of products made of polymer composite materials
• PhD - Lam N: Advancing numerical evaluation of model identifiability in noisy data.
• PhD - Laufer B: Characterising respiration from chest wall motion.
• PhD - Pernus N: Development of an instrumented mounting screw to assess climbing performance
• PhD - Powell D: Development of Machine Learning Approaches for Discriminating Between Head Impacts in Contact Sports
• PhD - Steven B: Analysis of haemodynamic implants using partical image velocimetry
• PhD - Wiltshire B: Sleep and Behaviour in Children Following a Mild Traumatic Brain Injury
• PhD - Yazdi SG: In-vitro modelling of aortic arch hemodynamic for surgical implant testing (2016)
• Masters - Bell T: Practical feasibility of an augmented rocket engine
• Masters - Hull B: Flight path modelling and analysis for monitoring volcanic events
• Honours - Jackson Crawford, Gace May, James McKenna, Piper Marshall: A novel device for elderly assist
• Honours - Thomas Hickford, Brianna McNeish, Logan Smith, Ethan Te Puni: Development of a cubsat to enable zero gravity experimentation
Completed
• PhD - Allison P: Investigation of novel surface preparation methods (2017)
• PhD - Allison SJ: Methoxyflurane metabolite (Fluoride) presence in ambulance staff (2021)
• PhD - Boyd B: Modelling mass transport enhancement in biological tissue using applied electric fields and ultrasound (2018)
• PhD - Damanhuri S: Improving model-based diagnosis of acute respiratory distress syndrome via increased mechanical accuracy (2014)
• PhD - Feng C: Inverse optimisation of a two armed robot for high precision manufacture. (2020)
• PhD - Fisk L: Novel numerical methods for enhanced regulation of ambulatory and outpatient glycemia (2014)
• PhD - Goodman M: Homogenisation Theory Applied to Coupled Mammalian Cells (2018)
• PhD - Holder Pearson L: The oral dynamic insulin sensitivity and secretion test (2020)
• PhD - Jamaludin U: Model-based methods for observing physiological changes in critically ill patients (2013)
• PhD - Kamoi S: The efficacy of pressure only estimation of cardiac behavior in critically ill patient with hemodynamic dysfucntion (2014)
• PhD - Langdon R: Optimising the robustness of pulmonary parameters yielded by model-based analysis of tracheal pressure flow signals. (2017)
• PhD - Mansell E: Identifiability of the drivers of glycaemic excursions in free living diabetes (2018)
• PhD - Morton S: Development of modelling strategies to capture respiratory distress in critically ill patients. (2019)
• PhD - Ortuno J: Design and validation of a low-cost energy recovery system for use in developing economies. (2019)
• PhD - Othman A: Efficacy of the Oral Dynamic Insulin Sensitivity and Secretion Test (ODISST) for Model-Based Diagnosis of the metabolic syndrome (2014)
• PhD - Petrov A: Brain Magnetic Resonance Elastography based on Rayleigh Damping material model (2013)
• PhD - Williamson P: Compliance effects in arterial stents (2022)
• PhD - Yazdi SG: In-silico modelling of aortic arch hemodynamic for surgical implant testing (2019)
• Masters - Austin W: Design and evaluation of landing apparatus for hypersonic spacecraft. (2020)
• Masters - Frewen T: Development of a portable milking platform for ovine dairy using TRIZ methodology (2018)
• Masters - Gorrie A: Design and optimisation of a low-cost, small-volume desalination plant (2016)
• Masters - Leung M: Optimisation of a heat rejection surface in a solar desalinator (2018)
• Masters - Steele T: Design and build of landing gear for a hypersonic space craft (2020)
• Masters - Wright F: Simulation of brain deformation and stress after impact (2021)
• Masters - Alnaser A: Design and optimisation of an airway branching model (ABM) for the simulation of the effect of gas exchange on the flow of gases at different generations of the airway (2016)
• Masters - Knoerzer A: Implementation and mathematical modelling of the pulmonary elastance of critically ill patients (2014)
• Masters - Laufner B: Determining the ability for various pulmonary models in differing clinical data sets and experimentation methods. (2015)
• Honours - Amy Fellowes, Georgia Trass, Hamish Dodd, Martin Johnson: Medsalv (2021)
• Honours - Ben Turner, Muhammad Mohd Zin: Methanex. (2013)
• Honours - Benjamin Doobie, David Sage, Peter Marffy: Elliots horticulture (2018)
• Honours - James Martin, Oscar Barkle, Nathan Denmead, Tom Wollerman: Martin Jetpack. (2014)
• Honours - Jess Napper, Lance Henderson, Tony Booth, Tom Blake, Lisa Fraser: Trimble. (2013)
• Honours - Kate Andrew, Christopher Harland, James Te Aika, Alex Mosley: Syft technologies (2017)
• Honours - Kevin O’Kane, Simon Reid, Lauren Hill, Nick Johnson: Gamechanger Cricket (2018)
• Honours - Laurence Lickfold, Sam Tullett, Zach Medich, Ben Hume: Medifab (2019)
• Honours - Lewis Commons, Maddy Win, Timothy Riddell, Shuma Kinjo: Shotover Camera Systems. (2014)
• Honours - Nathan Garry, Ruifa Huang, Sam Hasson, Gene Sams.: Britten Aero. (2016)
• Honours - Nigel Gibb, Georgina Blane, Shaun Lim, William Gillard: Hyvan Anaesthesia. (2016)
• Honours - Paul Eastwood, David Edwards, Jason Guey, Jack Moody: G.T. Composites. (2015)
• Honours - Ryan Carter, Christopher Tichborne, Arian Asghari, Albert Kim: Hammett agricultural solutions (2021)
• Honours - Sarah Smith, Leon Forbes, Zachary Andrews, Broderick Johnson: Active Refrigeration. (2017)
• Honours - Thomas Craig, Benjamin Francis, Christopher McFadden, Taylor Howatson: BLM engineering. (2015)

Review and Refereeing

Displaying all items.

• IFAC biomedical symposiums (8-11), IFAC World congresses (18-20), 12th IFAC Symposium on Computer Applications in Biotechnology, 8th Vienna International Conference on Mathematical Modelling, UKACC International Conference on Control 2010, 18th IFAC Symposium on System Identification,+ various local conferences ( 2008 - 2023)
• Reviewed for: PLoS ONE, Biomedical signal processing and control, Control engineering practice, Journal of diabetes science and technology, Biomedical engineering online, Computers in biology and medicine, Computer methods and programmes in biomedicine, Diabetes therapy, Diabetes technology and therapeutics, Industiral and engineering chemistry research, IEEE transactions of biomedical engineering, IFAC journal of systems and control, International journal of basic and clinical endocrinology, Intensive care medicine, Journal of clinical monitoring and computing, Mathematical biosciences, Mathematics and computers in simulation, Medical engineering and physics, Open biomedical engineering, Journal of process control, Proceedings of the royal society. ( 2008 - 2023)