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Associate Professor Matthew Stott

Contact

Department: School of Biological Sciences

Email: matthew.stott@canterbury.ac.nz

Direct Dial: +64 3 3692511

Office:

Language: English

About
Research / Creative works
Projects
Methods & Equipment

Fields of Research

  • geomicrobiology
  • extremophiles
  • microbial ecology
  • microbial cultivation
  • microbial genomics
  • environmental microbiolgy
  • thermophiles
  • geothermal ecosystems
  • biotechnology

Researcher Summary

My research focusses on the microbial ecology and geobiological interactions within extreme ecosystems with the aim of underpinning conservation efforts, providing for industrial applications, and to understand the ecosystem services provided by these microbial communities. Much of my fieldwork is carried out in geothermal ecosystems in the central north island of New Zealand known as the Taupo Volcanic Zone.

I investigate the taxonomic, genomic and functional diversity of extremophile communities using cross-disciplinary approaches.
These include the cultivation and characterisation of novel microbial
strains (I have described first representatives of a new phylum, and a class, as well several genera and species), molecular community and
geochemical surveys (e.g. the 1000 Springs Project: http://1000Springs.org.nz), and the
genomic and physiological analyses of isolates and consortium (particularly
methanotrophs and atmospheric trace gas scavengers) to understand growth and survival mechanisms within these challenging environments

The themes of this research have both strong conservation and industrial foci.

Subject Area: Disciplines

  • Biology: Molecular, Cellular and Whole Organism Biology: Biomolecular Interactions; Genomics/Bioinformatics; Microbiology

Resources

  • Stott Laboratory webpage
  • New Zealand Microbial Ecology Consortium

Prizes and Awards

  • Fulbright Scholar ( 2016 )

Research/Scholarly/Creative Works

  • Power JF., Welford HE., Carere CR., McDonald IR., Craig SC. and Stott MB. (2023) Draft Genome Sequence of Venenivibrio stagnispumantis CP.B2T, Isolated from Champagne Pool, Waiotapu, Aotearoa-New Zealand. Microbiology Resource Announcements 12(2) http://dx.doi.org/10.1128/mra.01074-22. (Journal Articles)
  • Buessecker S., Palmer M., Lai D., Dimapilis J., Mayali X., Mosier D., Jiao JY., Colman DR., Keller LM. and St. John E. (2022) An essential role for tungsten in the ecology and evolution of a previously uncultivated lineage of anaerobic, thermophilic Archaea. Nature Communications 13(1) http://dx.doi.org/10.1038/s41467-022-31452-8. (Journal Articles)
  • Noell SE., Baptista MS., Smith E., McDonald IR., Lee CK., Stott MB., Amend JP. and Cary SC. (2022) Unique Geothermal Chemistry Shapes Microbial Communities on Mt. Erebus, Antarctica. Frontiers in Microbiology 13 http://dx.doi.org/10.3389/fmicb.2022.836943. (Journal Articles)
  • Carere CR., Hards K., Wigley K., Carman L., Houghton KM., Cook GM. and Stott MB. (2021) Growth on Formic Acid Is Dependent on Intracellular pH Homeostasis for the Thermoacidophilic Methanotroph Methylacidiphilum sp. RTK17.1. Frontiers in Microbiology 12 http://dx.doi.org/10.3389/fmicb.2021.651744. (Journal Articles)
  • Colman DR., Lindsay MR., Harnish A., Bilbrey EM., Amenabar MJ., Selensky MJ., Fecteau KM., Debes RV., Stott MB. and Shock EL. (2021) Seasonal hydrologic and geologic forcing drive hot spring geochemistry and microbial biodiversity. Environmental Microbiology 23(7): 4034-4053. http://dx.doi.org/10.1111/1462-2920.15617. (Journal Articles)
  • Murray AE., Freudenstein J., Gribaldo S., Hatzenpichler R., Hugenholtz P., Kämpfer P., Konstantinidis KT., Lane CE., Papke RT. and Parks DH. (2021) Author Correction: Roadmap for naming uncultivated Archaea and Bacteria (Nature Microbiology, (2020), 5, 8, (987-994), 10.1038/s41564-020-0733-x). Nature Microbiology 6(1): 136. http://dx.doi.org/10.1038/s41564-020-00827-2. (Journal Articles)
  • Beam JP., Becraft ED., Brown JM., Schulz F., Jarett JK., Bezuidt O., Poulton NJ., Clark K., Dunfield PF. and Ravin NV. (2020) Ancestral Absence of Electron Transport Chains in Patescibacteria and DPANN. Frontiers in Microbiology 11 http://dx.doi.org/10.3389/fmicb.2020.01848. (Journal Articles)
  • Carere CR., Steen JA., Hugenholtz P. and Stott MB. (2020) Draft Genome Sequence of Limisphaera ngatamarikiensis NGM72.4T, a Moderately Alkaliphilic Thermophile Belonging to the Class Verrucomicrobiae. Microbiology Resource Announcements 9(18) http://dx.doi.org/10.1128/MRA.00225-20. (Journal Articles)
  • Compton BJ., Lagutin K., Dyer BS., Ryan J., MacKenzie A., Stott MB., Nekrasov EV., Painter GF. and Vyssotski M. (2020) Isolation and Synthesis of Glycophospholipids from the extremophile Chthonomonas calidirosea. Asian Journal of Organic Chemistry 9(11): 1802-1814. http://dx.doi.org/10.1002/ajoc.202000357. (Journal Articles)
  • Cullings K., Stott MB., Marinkovich N., DeSimone J. and Bhardwaj S. (2020) Phylum-level diversity of the microbiome of the extremophilic basidiomycete fungus Pisolithus arhizus (Scop.) Rauschert: An island of biodiversity in a thermal soil desert. MicrobiologyOpen 9(8) http://dx.doi.org/10.1002/mbo3.1062. (Journal Articles)
  • Dickie I., Heinemann J., Garrill A., Lauren-Manuera N., Meisrimler C., Stott M. and Remus-Emsermann M. (2020) Teaching laboratory best practice considerations for Covid19. Research gate: http://dx.doi.org/10.6084/m9.figshare.14923149.v2. (Chapters)
  • Gionfriddo CM., Stott MB., Power JF., Ogorek JM., Krabbenhoft DP., Wick R., Holt K., Chen LX., Thomas BC. and Banfield JF. (2020) Genome-resolved metagenomics and detailed geochemical speciation analyses yield new insights into microbial mercury cycling in geothermal springs. Applied and Environmental Microbiology 86(15) http://dx.doi.org/10.1128/AEM.00176-20. (Journal Articles)
  • Hudson M., Garrison NA., Sterling R., Caron NR., Fox K., Yracheta J., Anderson J., Wilcox P., Arbour L. and Brown A. (2020) Rights, interests and expectations: Indigenous perspectives on unrestricted access to genomic data. Nature Reviews Genetics 21(6): 377-384. http://dx.doi.org/10.1038/s41576-020-0228-x. (Journal Articles)
  • Massiot C., Adam L., Bertrand E., Caratori Tontini F., Kilgour G., Milicich S., Miller C., Nichols A., Stott M. and Ventura G. (2020) An idea: scientific drilling project “interaction”: interaction between life, rifting and caldera tectonics in Okataina. Christchurch: Geoscience Society of New Zealand Annual Conference, 22-25 Nov 2020. (Conference Contributions - Other)
  • Murray AE., Freudenstein J., Gribaldo S., Hatzenpichler R., Hugenholtz P., Kämpfer P., Konstantinidis KT., Lane CE., Papke RT. and Parks DH. (2020) Roadmap for naming uncultivated Archaea and Bacteria. Nature Microbiology 5: 987-994. http://dx.doi.org/10.1038/s41564-020-0733-x. (Journal Articles)
  • Stott M., Houghton K., Carere RC. and Hanada S. (2020) Thermoflavifilum. http://dx.doi.org/10.1002/9781118960608.gbm01805. (Journal Articles)
  • Carere CR., McDonald B., Peach HA., Greening C., Gapes DJ., Collet C. and Stott MB. (2019) Hydrogen oxidation influences glycogen accumulation in a verrucomicrobial methanotroph. Frontiers in Microbiology 10(AUG) http://dx.doi.org/10.3389/fmicb.2019.01873. (Journal Articles)
  • Gardner PP., Watson RJ., Morgan XC., Draper JL., Finn RD., Morales SE. and Stott MB. (2019) Identifying accurate metagenome and amplicon software via a meta-analysis of sequence to taxonomy benchmarking studies. PeerJ 2019(1) http://dx.doi.org/10.7717/peerj.6160. (Journal Articles)
  • Houghton KM., Carere CR., Stott MB. and McDonald IR. (2019) Thermophilic methanotrophs: In hot pursuit. FEMS Microbiology Ecology 95(9) http://dx.doi.org/10.1093/femsec/fiz125. (Journal Articles)
  • Islam ZF., Cordero PRF., Feng J., Chen YJ., Bay SK., Jirapanjawat T., Gleadow RM., Carere CR., Stott MB. and Chiri E. (2019) Two Chloroflexi classes independently evolved the ability to persist on atmospheric hydrogen and carbon monoxide. ISME Journal 13(7): 1801-1813. http://dx.doi.org/10.1038/s41396-019-0393-0. (Journal Articles)
  • St. John E., Liu Y., Podar M., Stott MB., Meneghin J., Chen Z., Lagutin K., Mitchell K. and Reysenbach AL. (2019) A new symbiotic nanoarchaeote (Candidatus Nanoclepta minutus) and its host (Zestosphaera tikiterensis gen. nov., sp. nov.) from a New Zealand hot spring. Systematic and Applied Microbiology 42(1): 94-106. http://dx.doi.org/10.1016/j.syapm.2018.08.005. (Journal Articles)
  • Tomazini A., Higasi P., Manzine LR., Stott M., Sparling R., Levin DB. and Polikarpov I. (2019) A novel thermostable GH5 β-xylosidase from Thermogemmatispora sp. T81. New Biotechnology 53: 57-64. http://dx.doi.org/10.1016/j.nbt.2019.07.002. (Journal Articles)
  • Oliverio AM., Power JF., Washburne A., Cary SC., Stott MB. and Fierer N. (2018) The ecology and diversity of microbial eukaryotes in geothermal springs. ISME Journal 12(8): 1918-1928. http://dx.doi.org/10.1038/s41396-018-0104-2. (Journal Articles)
  • Power JF., Carere CR., Lee CK., Wakerley GLJ., Evans DW., Button M., White D., Climo MD., Hinze AM. and Morgan XC. (2018) Microbial biogeography of 925 geothermal springs in New Zealand. Nature Communications 9(1) http://dx.doi.org/10.1038/s41467-018-05020-y. (Journal Articles)
  • Reysenbach AL., Donaho JA., Kelley JF., John ES., Turner C., Podar M. and Stott MB. (2018) Draft genome sequence of a Dictyoglomus sp. from an enrichment culture of a New Zealand geothermal spring. Genome Announcements 6(11) http://dx.doi.org/10.1128/genomeA.00150-18. (Journal Articles)
  • Stewart LC., Houghton K., Carere CR., Power JF., Chambefort I. and Stott MB. (2018) Interaction between ferruginous clay sediment and an iron-reducing hyperthermophilic Pyrobaculum sp. in a terrestrial hot spring. FEMS Microbiology Ecology 94(11) http://dx.doi.org/10.1093/FEMSEC/FIY160. (Journal Articles)
  • Stewart LC., Stucker VK., Stott MB. and de Ronde CEJ. (2018) Marine-influenced microbial communities inhabit terrestrial hot springs on a remote island volcano. Extremophiles 22(4): 687-698. http://dx.doi.org/10.1007/s00792-018-1029-4. (Journal Articles)
  • Stott M. and Lueders T. (2018) Deep life, kia ora! FEMS Microbiology Ecology 94(11) fiy176: 2. http://dx.doi.org/10.1093/femsec/fiy176. (Journal Articles)
  • Stott M., Carere C., Greening C. and Morgan X. (2018) Pyrinomonas. : 8. http://dx.doi.org/10.1002/9781118960608.gbm01533. (Journal Articles)
  • Stott M., Lee C-Y., Morgan XC. and Carere C. (2018) Chthonomonadaceae. : 1. http://dx.doi.org/10.1002/9781118960608.fbm00299. (Journal Articles)
  • Stott M., Lee C-Y., Morgan XC. and Carere C. (2018) Chthonomonadales. : 1. http://dx.doi.org/10.1002/9781118960608.obm00136. (Journal Articles)
  • Stott M., Lee C-Y., Morgan XC. and Carere C. (2018) Chthonomonadetes. : 1. http://dx.doi.org/10.1002/9781118960608.cbm00062. (Journal Articles)
  • Stott M., Lee KC-Y., Morgan XC. and Carere CR. (2018) Chthonomonas. : 6. http://dx.doi.org/10.1002/9781118960608.gbm01476. (Journal Articles)
  • Tomazini A., Lal S., Munir R., Stott M., Henrissat B., Polikarpov I., Sparling R. and Levin DB. (2018) Analysis of carbohydrate-active enzymes in thermogemmatispora sp. strain T81 reveals carbohydrate degradation ability. Canadian Journal of Microbiology 64(12): 992-1003. http://dx.doi.org/10.1139/cjm-2018-0336. (Journal Articles)
  • Wushke S., Fristensky B., Zhang XL., Spicer V., Krokhin OV., Levin DB., Stott MB. and Sparling R. (2018) A metabolic and genomic assessment of sugar fermentation profiles of the thermophilic Thermotogales, Fervidobacterium pennivorans. Extremophiles 22(6): 965-974. http://dx.doi.org/10.1007/s00792-018-1053-4. (Journal Articles)
  • Xu B., Aitken EJ., Baker BP., Turner CA., Harvey JE., Stott MB., Power JF., Harris PWR., Keyzers RA. and Brimble MA. (2018) Genome mining, isolation, chemical synthesis and biological evaluation of a novel lanthipeptide, tikitericin, from the extremophilic microorganism: Thermogemmatispora strain T81. Chemical Science 9(37): 7311-7317. http://dx.doi.org/10.1039/c8sc02170h. (Journal Articles)
  • Carere CR., Hards K., Houghton KM., Power JF., McDonald B., Collet C., Gapes DJ., Sparling R., Boyd ES. and Cook GM. (2017) Mixotrophy drives niche expansion of verrucomicrobial methanotrophs. The ISME Journal 11(11): 2599-2610. http://dx.doi.org/10.1038/ismej.2017.112. (Journal Articles)
  • Ji M., Greening C., Vanwonterghem I., Carere CR., Bay SK., Steen JA., Montgomery K., Lines T., Beardall J. and Van Dorst J. (2017) Atmospheric trace gases support primary production in Antarctic desert surface soil. Nature 552(7685): 400-403. http://dx.doi.org/10.1038/nature25014. (Journal Articles)
  • Ney B., Ahmed FH., Carere CR., Biswas A., Warden AC., Morales SE., Pandey G., Watt SJ., Oakeshott JG. and Taylor MC. (2017) The methanogenic redox cofactor F 420 is widely synthesized by aerobic soil bacteria. ISME Journal 11(1): 125-137. http://dx.doi.org/10.1038/ismej.2016.100. (Journal Articles)
  • Power J., Oliverio A., Wakerley G., Evans D., Lee C., Button M., White D., Hinze A., Climo M. and Carere R. (2017) A microbial biogeography and diversity assessment of geothermal springs in New Zealand. Skukuza, Kruger National Park, South Africa: 14th International meeting on Thermophiles 2017, 27 Aug-1 Sep 2017. (Conference Contributions - Other)
  • Ward L., Taylor MW., Power JF., Scott BJ., McDonald IR. and Stott MB. (2017) Microbial community dynamics in Inferno Crater Lake, a thermally fluctuating geothermal spring. The ISME Journal 11(5): 1158-1167. http://dx.doi.org/10.1038/ismej.2016.193. (Journal Articles)
  • Zaremba-Niedzwiedzka K., Caceres EF., Saw JH., Bäckström D., Juzokaite L., Vancaester E., Seitz KW., Anantharaman K., Starnawski P. and Kjeldsen KU. (2017) Asgard archaea illuminate the origin of eukaryotic cellular complexity. Nature 541(7637): 353-358. http://dx.doi.org/10.1038/nature21031. (Journal Articles)
  • Greening C., Biswas A., Carere CR., Jackson CJ., Taylor MC., Stott MB., Cook GM. and Morales SE. (2016) Genomic and metagenomic surveys of hydrogenase distribution indicate H2 is a widely utilised energy source for microbial growth and survival. The ISME Journal 10(3): 761-777. http://dx.doi.org/10.1038/ismej.2015.153. (Journal Articles)
  • Lee KC., Stott MB., Dunfield PF., Huttenhower C., McDonald IR. and Morgan XC. (2016) The Chthonomonas calidirosea genome is highly conserved across geographic locations and distinct chemical and microbial environments in New Zealand's Taupō Volcanic Zone. Applied and Environmental Microbiology 82(12): 3572-3581. http://dx.doi.org/10.1128/AEM.00139-16. (Journal Articles)
  • Stott MB. and Taylor MW. (2016) Microbial ecology research in New Zealand. New Zealand Journal of Ecology 40(1): 12-28. (Journal Articles)
  • Anders H., Power JF., MacKenzie AD., Lagutin K., Vyssotski M., Hanssen E., Moreau JW. and Stott MB. (2015) Limisphaera ngatamarikiensis gen. nov., sp. nov., a thermophilic, pink-pigmented coccus isolated from subaqueous mud of a geothermal hotspring. International Journal of Systematic and Evolutionary Microbiology 65: 1114-1121. http://dx.doi.org/10.1099/ijs.0.000063. (Journal Articles)
  • Greening C., Carere CR., Rushton-Green R., Harold LK., Hards K., Taylor MC., Morales SE., Stott MB. and Cook GM. (2015) Persistence of the dominant soil phylum Acidobacteria by trace gas scavenging. Proceedings of the National Academy of Sciences of the United States of America 112(33): 10497-10502. http://dx.doi.org/10.1073/pnas.1508385112. (Journal Articles)
  • Houghton KM., Morgan XC., Lagutin K., Mackenzie AD., Vyssotskii M., Mitchell KA., McDonald IR., Morgan HW., Power JF. and Moreau JW. (2015) Thermorudis pharmacophila sp. Nov., a novel member of the class thermomicrobia isolated from geothermal soil, and emended descriptions of thermomicrobium roseum, thermomicrobium carboxidum, thermorudis peleae and sphaerobacter thermophilus. International Journal of Systematic and Evolutionary Microbiology 65(12): 4479-4487. http://dx.doi.org/10.1099/ijsem.0.000598. (Journal Articles)
  • Anders H., Dunfield PF., Lagutin K., Houghton KM., Power JF., MacKenzie AD., Vyssotski M., Ryan JLJ., Hanssen EG. and Moreau JW. (2014) Thermoflavifilum aggregans gen. nov., sp. nov., a thermophilic and slightly halophilic filamentous bacterium from the phylum Bacteroidetes. International Journal of Systematic and Evolutionary Microbiology 64(PART 4): 1264-1270. http://dx.doi.org/10.1099/ijs.0.057463-0. (Journal Articles)
  • Crowe MA., Power JF., Morgan XC., Dunfield PF., Lagutin K., Rijpstra WIC., Rijpstra IC., Sinninghe Damste JS., Houghton KM. and Ryan JLJ. (2014) Pyrinomonas methylaliphatogenes gen. nov., sp. nov., a novel group 4 thermophilic member of the phylum Acidobacteria from geothermal soils. International Journal of Systematic and Evolutionary Microbiology 64(1): 220-227. http://dx.doi.org/10.1099/ijs.0.055079-0. (Journal Articles)
  • Lee KCY., Dunfield PF. and Stott MB. (2014) The phylum Armatimonadetes. The Prokaryotes: Other major lineages of Bacteria and the Archaea (4 ed.): 447-458. http://dx.doi.org/10.1007/978-3-642-38954-2_388. (Chapters)
  • Lee KCY., Morgan XC., Dunfield PF., Tamas I., McDonald IR. and Stott MB. (2014) Genomic analysis of Chthonomonas calidirosea, the first sequenced isolate of the phylum Armatimonadetes. The ISME Journal 8(7): 1522-1533. http://dx.doi.org/10.1038/ismej.2013.251. (Journal Articles)
  • Sharp CE., Brady AL., Sharp GH., Grasby SE., Stott MB. and Dunfield PF. (2014) Humboldt's spa: Microbial diversity is controlled by temperature in geothermal environments. ISME Journal 8(6): 1166-1174. http://dx.doi.org/10.1038/ismej.2013.237. (Journal Articles)
  • Sharp CE., Smirnova AV., Graham JM., Stott MB., Khadka R., Moore TR., Grasby SE., Strack M. and Dunfield PF. (2014) Distribution and diversity of Verrucomicrobia methanotrophs in geothermal and acidic environments. Environmental Microbiology http://dx.doi.org/10.1111/1462-2920.12454. (Journal Articles)
  • Sinninghe Damsté JS., Rijpstra WIC., Hopmans EC., Foesel BU., Wüst PK., Overmann J., Tank M., Bryant DA., Dunfield PF. and Houghton K. (2014) Ether- and ester-bound iso-diabolic acid and other lipids in members of Acidobacteria subdivision 4. Applied and Environmental Microbiology 80(17): 5207-5218. http://dx.doi.org/10.1128/AEM.01066-14. (Journal Articles)
  • Stott M. (2014) TBD. Taupo, New Zealand: Collapse Calderas Workshop. (Oral Presentations)
  • Lee KCY., Herbold W., Dunfield PF., Morgan XC., McDonald IR. and Stott MB. (2013) Phylogenetic delineation of the novel phylum Armatimonadetes (former candidate division OP10) and definition of two novel candidate divisions. Applied and Environmental Microbiology 79(7): 2484-2487. http://dx.doi.org/10.1128/AEM.03333-12. (Journal Articles)
  • Dunfield PF., Tamas I., Lee KC., Morgan XC., McDonald IR. and Stott MB. (2012) Electing a candidate: A speculative history of the bacterial phylum OP10. Environmental Microbiology 14(12): 3069-3080. http://dx.doi.org/10.1111/j.1462-2920.2012.02742.x. (Journal Articles)
  • Stott MB., Morgan X., Anders H., Lagutin K., Vyssotskii M., Ryan J., King C., King G. and Dunfield P. (2012) Ecology and characterisation of Thermogemmatispora strain T81 and other NZ-isolated cellulolytic thermophiles. Winnepeg, Canada: Microbial Genomics for Biofuels and Co-Products from Biorefining Processes (MGBC2) Workshop, 01 Jan 2012. (Oral Presentations)
  • Lee KCY., Dunfield PF., Morgan XC., Crowe MA., Houghton KM., Vyssotski M., Ryan JLJ., Lagutin K., McDonald IR. and Stott MB. (2011) Chthonomonas calidirosea gen. nov., sp. nov., an aerobic, pigmented, thermophilic micro-organism of a novel bacterial class, Chthonomonadetes classis nov., of the newly described phylum Armatimonadetes originally designated candidate division OP10. International Journal of Systematic and Evolutionary Microbiology 61(10): 2482-2490. http://dx.doi.org/10.1099/ijs.0.027235-0. (Journal Articles)
  • Op den Camp HJM., Islam T., Stott MB., Harhangi HR., Hynes A., Schouten S., Jetten MSM., Birkeland NK., Pol A. and Dunfield PF. (2009) Environmental, genomic and taxonomic perspectives on methanotrophic Verrucomicrobia. Environmental Microbiology Reports 1(5): 293-306. http://dx.doi.org/10.1111/j.1758-2229.2009.00022.x. (Journal Articles)
  • Hou S., Makarova KS., Saw JHW., Senin P., Ly BV., Zhou Z., Ren Y., Wang J., Galperin MY. and Omelchenko MV. (2008) Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia. Biology Direct 3 http://dx.doi.org/10.1186/1745-6150-3-26. (Journal Articles)
  • Stott MB., Crowe MA., Mountain BW., Smirnova AV., Hou S., Alam M. and Dunfield PF. (2008) Isolation of novel bacteria, including a candidate division, from geothermal soils in New Zealand. Environmental Microbiology 10(8): 2030-2041. http://dx.doi.org/10.1111/j.1462-2920.2008.01621.x. (Journal Articles)
  • Dunfield PF., Yuryev A., Senin P., Smirnova AV., Stott MB., Hou S., Ly B., Saw JH., Zhou Z. and Ren Y. (2007) Methane oxidation by an extremely acidophilic bacterium of the phylum Verrucomicrobia. Nature 450(7171): 879-882. http://dx.doi.org/10.1038/nature06411. (Journal Articles)
  • Mountain BW., Benning LG., Dunfield PF. and Stott MB. (2006) The silicification of extremophilic biofilms: Abiotic vs. biotic. Melbourne, Australia: Goldschmidt, 27 Aug-1 Sep 2006. (Conference Contributions - Other)
  • Stott MB., Sutton DC., Watling HR. and Franzmann PD. (2003) Comparative leaching of Chalcopyrite by selected acidophilic Bacteria and Archaea. Geomicrobiology Journal 20(3): 215-230. http://dx.doi.org/10.1080/01490450303875. (Journal Articles)
  • Stott MB., Sutton DC., Watling HR. and Franzmann PD. (2003) Comparative leaching of chalcopyrite by selected acidophilic Bacteria and Archaea. GEOMICROBIOLOGY JOURNAL 20(3): 215-230. http://dx.doi.org/10.1080/01490450303875. (Journal Articles)
  • Stott MB., Watling HR., Franzmann PD. and Sutton D. (2000) Role of iron-hydroxy precipitates in the passivation of chalcopyrite during bioleaching. Minerals Engineering 13(10): 1117-1127. http://dx.doi.org/10.1016/S0892-6875(00)00095-9. (Journal Articles)
  • Stott MB., Zappia LR., Franzmann PD., Miller PC., Watling HR. and Houchin MR. (1999) Bacterial degradation of thiocyanate in saline process water. Process Metallurgy 9(C): 809-818. http://dx.doi.org/10.1016/S1572-4409(99)80172-2. (Journal Articles)

Future Research

  • Bioremediation of industrial waste gas streams using extremophiles
  • Cultivation of new Venenivibrio spp.
  • Investigations into the microbiome within the fruiting body of Pisolithus fungi

Key Methodologies

  • microbial cultivation
  • bioreactors
  • genomics and sequencing
  • microbial diversity
  • microbial taxonomy
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