Research/Scholarly/Creative Works

• Pike MD., Bose SK., Mallinson JB., Acharya SK., Shirai S., Galli E., Weddell SJ., Bones PJ., Arnold MD. and Brown SA. (2020) Atomic scale dynamics drive brain-like avalanches in percolating nanostructured networks. Nano Letters 20(5): 3935-3942. http://dx.doi.org/10.1021/acs.nanolett.0c01096. (Journal Articles)

• Campbell JD., Pretty CG., Chase JG. and Bones PJ. (2018) A Robust Method of Peak Detection in Noisy PPG Signals Using a Structure of IIR Filters. In MESA 2018 Proceedings http://dx.doi.org/10.1109/MESA.2018.8449169. (Conference Contributions - Published)

• Campbell JD., Pretty CG., Chase JG. and Bones PJ. (2018) Near-Real-Time Detection of Pulse Oximeter PPG Peaks Using Wavelet Decomposition. In IFAC-PapersOnLine 51(27): 146-151. http://dx.doi.org/10.1016/j.ifacol.2018.11.652. (Conference Contributions - Published)

• Weddell SJ. and Bones P. (2018) Wavefront prediction with reservoir computing for minimizing the effects of angular anisoplanatism. Applied Optics 57(25): 7140-7151. http://dx.doi.org/10.1364/AO.57.007140. (Journal Articles)

• Weddell SJ. and Bones PJ. (2018) Wavefront prediction with reservoir computing for minimizing the effects of angular anisoplanatism. Applied Optics 57(25): 7140-7151. http://dx.doi.org/10.1364/AO.57.007140. (Journal Articles)

• Bones PJ., King L. and Millane RP. (2017) Use of (N-1)-D expansions for N-D phase unwrapping in MRI. In Proceedings of SPIE 10410 http://dx.doi.org/10.1117/12.2275878. (Conference Contributions - Published)

• Knopp S., Bones P., Weddell SJ. and Jones R. (2017) A software framework for real-time multi-modal detection of microsleeps. Australasian Physical and Engineering Sciences in Medicine 40(3): 739-749. http://dx.doi.org/10.1007/s13246-017-0559-x. (Journal Articles)

• Wojtas DH; Millane R; Bones P; Green R (Ed.) (2017) Proceedings of the International Conference of Image and Vision Computing New Zealand (IVCNZ2017). New Zealand. (Edited Volumes)

• Bones P., King L. and Millane R. (2016) MR imaging near metal: The POP algorithm. In International Conference Image and Vision Computing New Zealand 0 http://dx.doi.org/10.1109/IVCNZ.2016.7804436. (Conference Contributions - Published)

• Chen JPJ., Arnal RD., Morgan AJ., Bean RJ., Beyerlein KR., Chapman HN., Bones PJ., Millane RP. and Kirian RA. (2016) Reconstruction of an object from diffraction intensities averaged over multiple object clusters. Journal of Optics (United Kingdom) 18(11) http://dx.doi.org/10.1088/2040-8978/18/11/114003. (Journal Articles)

• Bones PJ. and Maclaren JR. (2015) Coping with motion in MRI: developments since TRELLIS. In IVCNZ 2015 Proceedings: 5. http://dx.doi.org/10.1109/IVCNZ.2015.7761516. (Conference Contributions - Published)

• Bones PJ., Fiddy MA. and Millane RP. (2015) Proceedings of SPIE 9600: Image Reconstruction from Incomplete Data VIII. Bellingham: SPIE. 178pp. http://dx.doi.org/10.1117/12.2218459. (Edited Volumes)

• Bones PJ., King LJ. and Millane RP. (2015) Phase estimation for magnetic resonance imaging near metal prostheses. In Proceedings of SPIE 9600: 960007, 12pp. http://dx.doi.org/10.1117/12.2188662. (Conference Contributions - Published)

• Chen JPJ., Kirian RA., Bean RJ., Beyerlein KR., Chapman HN., Bones P., Arnal RD., Millane RP. and Spence JCH. (2015) Phase retrieval of randomly terminated finite crystals. Rovinj, Croatia: 29th European Crystallographic Meeting, 23-28 Aug 2015. (Conference Contributions - Other)

• Chen JPJ., Kirian RA., Beyerlein KR., Bean RJ., Morgan AJ., Yefanov OM., Arnal RD., Wojtas DH., Bones PJ. and Chapman HN. (2015) Image reconstruction in serial femtosecond nanocrystallography using x-ray free-electron lasers. In Proceedings of SPIE 9600: 960002-960002. http://dx.doi.org/10.1117/12.2187610. (Conference Contributions - Published)

• King LJ., Bones PJ. and Millane RP. (2015) Phase unwrapping near metal implants with prior knowledge of the implant geometry. In Proceedings ISMRM 23: 1. (Conference Contributions - Published)

• LaRocco J., Innes C., Bones P., Weddell S. and Jones RD. (2015) Optimal EEG feature selection from average distances between events and non-events. (Abstract). In Caon M (Eds). Australasian Physical & Engineering Sciences in Medicine 38(1): 194-195. 2015: Springer. http://dx.doi.org/10.1007/s13246-014-0324-3. (Conference Contributions - Published)

• Aamir R., Chernoglazov A., Bateman CJ., Butler APH., Butler PH., Anderson NG., Bell ST., Panta RK., Healy JL. and Mohr JL. (2014) MARS spectral molecular imaging of lamb tissue: Data collection and image analysis. Journal of Instrumentation 9(2) P02005: 12. http://dx.doi.org/10.1088/1748-0221/9/02/P02005. (Journal Articles)

• Chen J., Kirian RA., Beyerlein KR., Bean RJ., Chapman HN., Bones PJ. and Millane RP. (2014) Phase retrieval from crystalline diffraction averaged over several different unit cells. Hamilton, New Zealand: Image & Vision Computing NZ, 1 Nov 2014. (Conference Contributions - Other)

• Chen JPJ., Kirian RA., Beyerlein KR., Bean RJ., Chapman HN., Bones PJ. and Millane RP. (2014) Phase retrieval from crystalline diffraction averaged over several different unit cells. In ACM International Conference Proceedings Series. (Conference Contributions - Published)

• King LJ., Bones PJ. and Millane RP. (2014) Phase unwrapping for magnetic resonance imaging near metal prostheses. In Proc. IVCNZ 2014: 130-135. (Conference Contributions - Published)

• King LJ., Bones PJ. and Millane RP. (2014) Phase unwrapping for magnetic resonance imaging near metal prostheses. In Proceedings IVCNZ, ACM International Conference Proceeding Series: 124-129. http://dx.doi.org/10.1145/2683405.2683408. (Conference Contributions - Published)

• LaRocco J., Innes RH., Bones PJ., Weddell SJ. and Jones RD. (2014) Optimal EEG feature selection from average distance between events and non-events. In EMBC 2014 Proceedings http://dx.doi.org/10.1109/EMBC.2014.6944165. (Conference Contributions - Published)

• Poudel GR., Innes CRH., Bones PJ., Watts R. and Jones RD. (2014) Losing the struggle to stay awake: Divergent thalamic and cortical activity during microsleeps. Human Brain Mapping 35(1): 257-269. http://dx.doi.org/10.1002/hbm.22178. (Journal Articles)

• Rajendran K., Walsh MF., de Ruiter NJA., Chernoglazov AI., Panta RK., Butler APH., Butler PH., Bell ST., Anderson NG. and Woodfield TBF. (2014) Reducing beam hardening effects and metal artefacts using Medipix3RX: With applications from biomaterial science. Journal of Instrumentation 9: 1-11. http://dx.doi.org/10.1088/1748-0221/9/03/P03015. (Journal Articles)

• Glass I., Bones PJ., Weddell SJ., Butler A. and Butler P. (2013) Physiological gating of the MARS spectral CT scanner and validation of artefact correction by proximity measure. In : 317-322. (Conference Contributions - Published)

• Glass I., Butler APH., Butler PH., Bones PJ. and Weddell SJ. (2013) Physiological gating of the MARS spectral micro CT scanner. In International Conference Image and Vision Computing New Zealand: 317-322. http://dx.doi.org/10.1109/IVCNZ.2013.6727036. (Conference Contributions - Published)

• Knopp S., Bones P., Weddell S., Innes C. and Jones R. (2013) A wearable device for measuring eye dynamics in real-world conditions. In Proceedings EMBS2013: 6615-6618. http://dx.doi.org/10.1109/EMBC.2013.6611072. (Conference Contributions - Published)

• Knopp SJ., Bones PJ., Weddell SJ., Innes CRH. and Jones RD. (2013) A wearable device for measuring eye dynamics in real-world conditions. In 35: 6615-6618. (Conference Contributions - Published)

• Wareing NM., Bones PJ. and Weddell SJ. (2013) A remote lab implementation using SAHARA. In ENZCon Conference Proceedings: 51-56. (Conference Contributions - Published)

• Bones PJ., Fiddy MA. and Millane RP. (2012) Image Reconstruction from Incomplete Data VII. Proceedings of SPIE Vol 8500. Bellingham: SPIE. 268pp. (Edited Volumes)

• Knopp SJ., Bones PJ., Weddell SJ., Innes CRH. and Jones RD. (2012) A miniature head-mounted camera for measuring eye closure. In ACM International Conference Proceeding Series: 313-318. http://dx.doi.org/10.1145/2425836.2425898. (Conference Contributions - Published)

• Opie AMT., Butler APH. and Bones PJ. (2012) Energy-resolved Compton scatter estimation for micro-CT. In Proceedings of SPIE 8506 Society of Photo-optical Instrumentation Engineers. http://dx.doi.org/10.1117/12.930319. (Conference Contributions - Published)

• Raffensperger PA., Bones PJ., McInnes AI. and Webb RY. (2012) Rewards for pairs of Q-learning agents conducive to turn-taking in medium-access games. Adaptive Behavior 20(4): 304-318. http://dx.doi.org/10.1177/1059712312449547. (Journal Articles)

• Raffensperger PA., Webb RY., Bones PJ. and McInnes AI. (2012) A Simple Metric for Turn-Taking in Emergent Communication. Adaptive Behavior 20(2): 104-116. http://dx.doi.org/10.1177/1059712311421831. (Journal Articles)

• Vafadar B. and Bones PJ. (2012) MR images from fewer data. In Proceedings of SPIE 8500:: 850003. http://dx.doi.org/10.1117/12.930926. (Conference Contributions - Published)

• (2011) Detection of lapses in responsiveness from the EEG.. Journal of neural engineering 8(1): 016003. (Journal Articles)

• Bones PJ. and Wu B. (2011) Sparse sampling in MRI. In Dougherty G (Ed.), Medical Image Processing: Techniques and Applications: 319-339. New York: Springer. http://dx.doi.org/10.1007/978-1-4419-9779-1_14. (Chapters)

• Bones PJ., Vafadar B. and Wu B. (2011) Applying compressed sensing and a temporal basis to magnetic resonance imaging. In Proceedings IVCNZ11. (Conference Contributions - Published)

• Opie AMT. and Bones PJ. (2011) Sensitivity to error of the truncated Hilbert transform technique for interior reconstruction. In Proceedings: 421-424. http://dx.doi.org/10.1109/ICIP.2011.6116540. (Conference Contributions - Published)

• Peiris MTR., Davidson PR., Bones PJ. and Jones RD. (2011) Detection of lapses in responsiveness from the EEG. Journal of Neural Engineering 8(1): 16003. http://dx.doi.org/10.1088/1741-2560/8/1/016003. (Journal Articles)

• Weddell SJ., Webb RY. and Bones P. (2011) Simulating wide-field optical wavefront propagation through single-layer turbulence. In Applications of Lasers for Sensing and Free Space Communications. (Conference Contributions - Published)

• Weddell SJ., Webb RY. and Bones PJ. (2011) Simulating wide-field optical wavefront propagation through single-layer turbulence. In Optics InfoBase Conference Papers. (Conference Contributions - Published)

• Weddell SJ., Webb RY. and Bones PJ. (2011) Simulating wide-field optical wavefront propagation through single-layer turbulence. In Optics InfoBase Conference Papers. (Conference Contributions - Published)

• Wu B., Millane RP., Watts R. and Bones PJ. (2011) Prior estimate-based compressed sensing in parallel MRI. Magnetic Resonance in Medicine 65(1): 83-95. http://dx.doi.org/10.1002/mrm.22545. (Journal Articles)

• (2010) The relationship between behavioural microsleeps, visuomotor performance and EEG theta.. Conference proceedings ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference : 4452-4455. (Journal Articles)

• (2010) Lapses of responsiveness: Characteristics, detection, and underlying mechanisms.. In Conference proceedings ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference: 1788-1791. (Conference Contributions - Published)

• Bainbridge-Smith A., Bones PJ., Butler A., Green R., Gough PT., Hann CE., Hayes MP., Millane RP., Mukundan R. and Watts R. (2010) Computational Image Processing at the University of Canterbury. In. (Conference Contributions - Published)

• Bones PJ., Butler APH., Ronaldson JP. and Opie AMT. (2010) Development of a CT scanner based on the Medipix family of detectors. In Proceedings of SPIE 7804: 1-10. http://dx.doi.org/10.1117/12.862166. (Conference Contributions - Published)

• Bones PJ., Fiddy MA. and Millane RP. (2010) Image Reconstruction from Incomplete Data VI. Proceedings of SPIE Vol. 7800. Bellingham: SPIE. 224pp. (Edited Volumes)

• Bones PJ., Vafadar B., Watts R. and Wu B. (2010) Imposing spatio-temporal support in magnetic resonance angiographic imaging. In Proceedings of SPIE 7800: 1-10. http://dx.doi.org/10.1117/12.861059. (Conference Contributions - Published)

• Ibáñez AJ., Scharte J., Bones P., Pirkl A., Meldau S., Baldwin IT., Hillenkamp F., Weis E. and Dreisewerd K. (2010) Rapid metabolic profiling of Nicotiana tabacum defence responses against Phytophthora nicotianae using direct infrared laser desorption ionization mass spectrometry and principal component analysis. Plant Methods 6(1) http://dx.doi.org/10.1186/1746-4811-6-14. (Journal Articles)

• Jones RD., Poudel G., Innes C. and Bones P. (2010) Lapses of responsiveness: Their characteristics, detection, and underlying mechanisms. In Frontier Conferences, http://frontiersin.org/conferences/individual_abstract_listing.php?conferid=944&pap=3707&ind_abs=1 http://dx.doi.org/10.3389/conf.fnins.2010.05.00008. (Conference Contributions - Published)

• Jones RD., Poudel GR., Innes CRH., Davidson PR., Peiris MTR., Malla AM., Signal L., Carroll GJ., Watts R. and Bones PJ. (2010) Lapses of responsiveness: Characteristics, detection, and underlying mechanisms. In Proceedings of Annual International Conference of IEEE Engineering in Medicine and Biology Society: 1788-1791. (Conference Contributions - Published)

• Malla AM., Davidson PR., Bones PJ., Green R. and Jones RD. (2010) Automated video-based measurement of eye closure for detecting behavioral microsleep. In Proceedings of Annual International Conference of IEEE Engineering in Medicine and Biology Society 32: 6741-6744. http://dx.doi.org/10.1109/IEMBS.2010.5626013. (Conference Contributions - Published)

• Poudel GR., Innes CRH., Bones PJ. and Jones RD. (2010) The relationship between behavioural microsleeps, visuomotor performance, and EEG theta. In Proceedings of Annual International Conference of IEEE Engineering in Medicine and Biology Society: 4452-4455. (Conference Contributions - Published)

• Poudel GR., Jones RD., Innes CRH., Bones PJ. and Watts R. (2010) Changes in BOLD activity during behavioural microsleeps. In New Zealand Medical Journal 123: 104-104. (Conference Contributions - Published)

• Poudel GR., Jones RD., Innes CRH., Bones PJ., Watts R. and Davidson PR. (2010) Measurement of BOLD changes due to cued eye-closure and stopping during a continuous visuomotor task via model-based and model-free approaches. IEEE Transactions on Neural Systems and Rehabilitation Engineering 18(5): 479-488. http://dx.doi.org/10.1109/TNSRE.2010.2050782. (Journal Articles)

• Bones P., Wu B., Vafadar B., Butler A. and Watts R. (2009) On improved temporal resolution for magnetic resonance angiography. San Jose, CA, USA: Signal Recovery and Synthesis (SRS) Topical Meeting and Tabletop Exhibit, 13-15 Oct 2009. (Conference Contributions - Other)

• Bones PJ., Wu B., Vafadar B., Butler APH. and Watts R. (2009) On improved temporal resolution for magnetic resonance angiography. In Optics InfoBase Conference Papers http://dx.doi.org/10.1364/srs.2009.stua3. (Conference Contributions - Published)

• Butler APH., Cook NJ., Schleich N., Butzer JS., Bones PJ., Anderson NG. and Butler PH. (2009) Processing of Spectral X-ray Data Using Principal Components Analysis. Prague, Czech Republic: 11th International Workshop on Radiation Imaging Detectors (iWoRiD 2009), 28 Jun-2 Jul 2009. (Conference Contributions - Other)

• Poudel GR., Jones RD., Innes CRH., Watts R., Signal TL. and Bones PJ. (2009) fMRI correlates of behavioural microsleeps during a continuous visuomotor task.. Conference proceedings ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference : 2919-2922. (Journal Articles)

• Poudel GR., Jones RD., Innes CRH., Watts R., Signal TL. and Bones PJ. (2009) fMRI correlates of behavioural microsleeps during a continuous visuomotor task. In Proceedings of the 31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society: Engineering the Future of Biomedicine, EMBC 2009: 2919-2922. http://dx.doi.org/10.1109/IEMBS.2009.5334486. (Conference Contributions - Published)

• Vafadar B., Wu B. and Bones PJ. (2009) A statistical method for display and segmentation of 3D image data. Wellington, New Zealand: Image and Vision Computing New Zealand (IVCNZ 2009), 23-25 Nov 2009. (Conference Contributions - Other)

• Wu B., Millane RP., Watts R. and Bones PJ. (2009) Improved matrix inversion in image plane parallel MRI. Magnetic Resonance Imaging 27(7): 942-953. http://dx.doi.org/10.1016/j.mri.2009.01.017. (Journal Articles)

• Wu B., Watts R., Butler A., Millane R. and Bones P. (2009) Contrast enhanced MRA with retrospective selection of acceleration factor. In Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM 2009) 17: 273. (Conference Contributions - Published)

• Wu B., Watts R., Millane R. and Bones P. (2009) An improved approach in applying compressed sensing in parallel MR imaging. In 2009 ISMRM Proceedings: 164-164. (Conference Contributions - Published)

• Yoon CH., Bodvarsson B., Klim S., Morkebjerg M., Mortensen S., Chen J., Maclaren JR., Luther PK., Squire JM. and Bones PJ. (2009) Determination of Myosin Filament Orientations in Electron Micrographs of Muscle Cross Sections. IEEE Transactions on Image Processing 18(4): 831-839. http://dx.doi.org/10.1109/TIP.2008.2011379. (Journal Articles)

• (2008) Functional-MRI correlates of cued slow-eye-closure and task non-responsiveness during visuomotor tracking.. Conference proceedings ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference : 4122-4125. (Journal Articles)

• Bödvarsson B., Klim S., Mørkebjerg M., Mortensen S., Yoon CH., Chen J., Maclaren JR., Luther PK., Squire JM. and Bones PJ. (2008) A morphological image processing method for locating myosin filaments in muscle electron micrographs. Image & Vision Computing 26(8): 1073-1080. http://dx.doi.org/10.1016/j.imavis.2007.11.008. (Journal Articles)

• Bones PJ. (2008) Heroes in biomedical engineering. Australasian Physical and Engineering Sciences in Medicine 31(3) http://dx.doi.org/10.1007/BF03179340. (Journal Articles)

• Bones PJ. and Maclaren JR. (2008) Robust statistical extension to TRELLIS motion correction in MRI. In Proceedings of SPIE 7076(Image Reconstruction from Incomplete Data V): 7076-0H. (Conference Contributions - Published)

• Bones PJ., Fiddy MA. and Millane RP. (2008) Image Reconstruction from Incomplete Data V. Bellingham: SPIE. (Edited Volumes)

• Butler A., Bones P. and Hurrell M. (2008) Prototype system for enhancement of frontal chest radiographs using eigenimage processing. Journal of Medical Imaging and Radiation Oncology 52(3): 244-253. http://dx.doi.org/10.1111/j.1440-1673.2008.01954.x. (Journal Articles)

• Butler AP., Cook NJ., Watts R., Bones PJ., Meyer J., van Leeuwen D. and Butler PH. (2008) Construction of a MARS scanner - a 3D spectroscopic x-ray imaging device. Adelaide, Australia: Royal Australian and New Zealand College of Radiologists 59th Annual Scientific Meeting (RANZCR 2008), 16-19 Oct 2008. (Conference Contributions - Other)

• Butzer J., Butler A., Butler P., Bones P., Cook N. and Tlustos L. (2008) Medipix Imaging - evaluation of datasets with PCA. In http://dx.doi.org/10.1109/IVCNZ.2008.4762080. (Conference Contributions - Published)

• Butzer JS., Butler AP., Butler PH., Cook NJ., Schleich N., Firsching M., Scott N., Anderson N., Bones PJ. and Ross F. (2008) Contrast-agent imaging with "MARS". Christchurch, New Zealand: Engineering and Physical Sciences in Medicine and the Australian Biomedical Engineering Conference (epsm abec 2008), 16-20 Nov 2008. (Conference Contributions - Other)

• Butzer JS., Butler AP., Cook NJ., Butler PH., Ross F., Schleich N., Selkirk J., Watts R., Meyer J. and Scott N. (2008) MARS: a 3D Spectroscopic X-Ray Imaging Device Based on Medipix. Dresden, Germany: IEEE Nuclear Science Symposium and Medical Imaging Conference, 19-25 Oct 2008. (Conference Contributions - Other)

• Butzer., S J., Butler., H AP., Butler., H P., Cook., J N., Schleich. and N. (2008) Spectroscopic Contrast-agent imaging with the Medipix CT-Scanner "MARS". Christchurch, New Zealand: Engineering and Physical Sciences in Medicine and the Australian Biomedical Engineering Conference 2008 (epsm abec 2008), 16-20 Nov 2008. (Conference Contributions - Other)

• Chen X., Gaynor P., King R., Chase JG., Bones P., Gough P. and Duke R. (2008) A project-based mechatronics program to reinforce mechatronic thinking - A restructuring experience. In IFAC Proceedings Volumes (IFAC-PapersOnline) 17(1 PART 1) http://dx.doi.org/10.3182/20080706-5-KR-1001.0406. (Conference Contributions - Published)

• Chen XQ., Gaynor P., King R., Chase JG., Bones P., Gough P. and Duke R. (2008) A Project-Based Mechatronics Program to Reinforce Mechatronic Thinking - A Restructuring Experience from University of Canterbury. In. (Conference Contributions - Published)

• Innes CRH., Poudel GR., Watts R., Bones PJ., Dalrymple-Alford JD. and Jones RD. (2008) Investigation of Lapses of Responsiveness via Simultaneous fMRI and EEG. Queenstown, New Zealand: 26th International Australasian Winter Conference on Brain Research (AWCBR), 23-27 Aug 2008. (Conference Contributions - Other)

• Lovell-Smith CD., Bones PJ., Hayes MP., Johnston RA. and Price NB. (2008) "Black Spot": A prototype camera module. In 2008 23rd International Conference Image and Vision Computing New Zealand, IVCNZ http://dx.doi.org/10.1109/IVCNZ.2008.4762112. (Conference Contributions - Published)

• Maclaren J., Wu B., Bones P., Millane R. and Watts R. (2008) Applying compressed sensing (CS) in parallel MRI. In. (Conference Contributions - Published)

• Maclaren J., Wu B., Bones P., Millane R. and Watts R. (2008) SENSE motion correction. In. (Conference Contributions - Published)

• Maclaren JR., Bones P., Millane RP. and Watts R. (2008) A physical Shepp-Logan head phantom. In Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM2008) 16: 181. (Conference Contributions - Published)

• Maclaren JR., Bones PJ., Millane RP. and Watts R. (2008) MRI with TRELLIS: a novel approach to motion correction. Magnetic Resonance Imaging 26(4): 474-483. http://dx.doi.org/10.1016/j.mri.2007.08.013. (Journal Articles)

• Moore CP., Arnold MD., Bones PJ. and Blaikie RJ. (2008) Analysis and Comparison of Simulation Techniques for Silver Superlenses. Melbourne, Australia: 2008 International Conference on Nanoscience and Nanotechnology (ICONN08), 25-29 Feb 2008. (Conference Contributions - Other)

• Moore CP., Arnold MD., Bones PJ. and Blaikie RJ. (2008) Image fidelity for single-layer and multi-layer silver superlenses. Journal of the Optical Society of America A, Optics, Image Science, and Vision 25(4): 911-918. (Journal Articles)

• Peiris MTR., Jones RD., Davidson PR. and Bones PJ. (2008) Event-based detection of lapses of responsiveness.. Conference proceedings ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference : 4960-4963. (Journal Articles)

• Peiris MTR., Jones RD., Davidson PR. and Bones PJ. (2008) Event-Based Detection of Lapses of Responsiveness. In Proceedings of 30th Annual International Conference of IEEE Engineering in Medicine and Biology Society (EMBC 2008) 30: 4960-4963. (Conference Contributions - Published)

• Poudel G., Jones RD., Innes CRH., Davidson PR., Watts R., Signal TL. and Bones PJ. (2008) Functional-MRI Correlates of Cued Slow-Eye-Closure and Task Non-Responsiveness During Visuomotor Tracking. In EMBC08 Proceedings 30: 4122-4125. http://dx.doi.org/10.1109/IEMBS.2008.4650116. (Conference Contributions - Published)

• Poudel GR., Jones RD., Innes CR. and Bones PJ. (2008) Characteristics and EEG spectral dynamics of behavioural microsleeps in a mock-MRI scanner. In NeuroImage 41(S1). (Conference Contributions - Published)

• Poudel GR., Jones RD., Innes CRH., Davidson PR., Watts R., Signal TL. and Bones P. (2008) Increased multisensory activity during cued slow-eye-closure while performing a visuomotor tracking task: an fMRI study. In Australasian Physical & Engineering Sciences in Medicine 31(4): 488-489. (Conference Contributions - Published)

• Schleich N., Butler APH., Cook NJ., Butzer JS., van Leeuwen D., Bones P. and Butler PH. (2008) Calibration and operation of the 3D spectroscopic "MARS" scanner. Christchurch, New Zealand: Engineering and Physical Sciences in Medicine and the Australian Biomedical Engineering Conference, 16-20 Nov 2008. (Conference Contributions - Other)

• Van Hese P., Vanrumste B., Hellez H., Carroll GJ., Vonck K., Jones RD., Bones PJ., D'Asseler Y. and Lemahieu I. (2008) Detection of focal epileptiform events in the EEG by spatio-temporal dipole clustering. Clinical Neurophysiology 119(8): 1756-1770. http://dx.doi.org/10.1016/j.clinph.2008.04.009. (Journal Articles)

• Wojas DH., Wu B., Ahnelt PK., Bones PJ. and Millane RP. (2008) Automated analysis of differential interference contrast microscopy images of the foveal cone mosaic. Journal of the Optical Society America, A: Optics, Image Science, and Vision 25(5): 1181-1189. http://dx.doi.org/10.1364/JOSAA.25.001181. (Journal Articles)

• Wu B., Maclaren JR., Millane RP., Watts R. and Bones PJ. (2008) Ordered k-space acquisition in contrast enhanced magnetic resonance angiography (CE-MRA). In Proceedings SPIE 6913(Physics of Medical Imaging): 152. http://dx.doi.org/10.1117/12.769429. (Conference Contributions - Published)

• Wu B., Millane RP., Watts R. and Bones PJ. (2008) Exploiting image sparsity in parallel magnetic resonance imaging (pMRI). In Proceedings of SPIE 7076(Image Reconstruction from Incomplete Data V) http://dx.doi.org/10.1117/12.796820. (Conference Contributions - Published)

• Wu B., Millane RP., Watts R. and Bones PJ. (2008) Sparsified inversion for direct image recovery in MRI. In Proceedings of the International Society for Magnetic Resonance in Medicine 16. (Conference Contributions - Published)

• Bones P. and Maclaren J. (2007) Artifact reduction in magnetic resonance imaging. In Signal Recovery and Synthesis (SRS). (Conference Contributions - Published)

• Bones PJ. and Maclaren JR. (2007) A physical Shepp-Logan head phantom for MRI. In Proceedings of Image and Vision Computing New Zealand (IVCNZ 2007): 317-320. (Conference Contributions - Published)

• Bones PJ. and Maclaren JR. (2007) Artifact reduction in magnetic resonance imaging. In Optics InfoBase Conference Papers http://dx.doi.org/10.1364/srs.2007.sma6. (Conference Contributions - Published)

• Bones PJ. and Maclaren JR. (2007) Improved bulk rotation detection and correction in MRI. In Proceedings of the 29th Annual International Conference of the IEEE EMBS: 2106-2109. http://dx.doi.org/10.1109/IEMBS.2007.4352737. (Conference Contributions - Published)

• Maclaren JR., Bones PJ., Millane RP. and Watts R. (2007) A modified view ordering for artifact reduction in MRI. In Proceedings of the 29th Annual International Conference of the IEEE EMBS: 2053-2056. http://dx.doi.org/10.1109/IEMBS.2007.4352724. (Conference Contributions - Published)

• Maclaren JR., Bones PJ., Millane RP. and Watts R. (2007) TRELLIS motion correction: Initial results in vivo. In Proceedings of the Joint Annual Meeting ISMRM-ESMRMB: 3426. (Conference Contributions - Published)

• Peiris MTR., Jones RD., Bones PJ. and Davidson PR. (2007) Detection of lapses of responsiveness from spectral and non-linear features in the EEG. (Abstract). In Sleep and Biological Rhythms 5(s1) http://dx.doi.org/10.1111/j.1479-8425.2007.00286.x. (Conference Contributions - Published)

• Peiris MTR., Jones RD., Bones PJ. and Davidson PR. (2007) Detection of Lapses of Responsiveness From Spectral and Non-Linear Features In The EEG. In. (Conference Contributions - Published)

• Wu B., Millane RP., Watts R. and Bones PJ. (2007) Improved 3D image plane parallel magnetic resonance imaging (pMRI) method. In Proceedings of Image and Vision Computing New Zealand (IVCNZ 2007): 311-316. (Conference Contributions - Published)

• (2006) Detecting behavioral microsleeps from EEG power spectra.. In Conference proceedings ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference: 5723-5726. (Conference Contributions - Published)

• Baker JP., Bones PJ. and Lim MA. (2006) Wireless Health Monitor. In Proceedings of the Thirteenth Electronics New Zealand Conference ENZCon'06: 7-12. (Conference Contributions - Published)

• Bones PJ., Butler APH. and Hurrell M. (2006) Enhancement of chest radiographs using eigenimage processing. In Proceedings SPIE 6316(Image Reconstruction from Incomplete Data IV): 63160C, 12pp. (Conference Contributions - Published)

• Bones PJ., Fiddy MA. and Millane RP. (2006) Image Reconstruction from Incomplete Data IV. Bellingham: SPIE. (Edited Volumes)

• Bones PJ., Fiddy MA. and Millane RP. (2006) Proceedings of SPIE - The International Society for Optical Engineering: Introduction. Proceedings of SPIE - The International Society for Optical Engineering 6316. (Other)

• Bones PJ., Maclaren JR., Millane RP. and Watts R. (2006) Quantifying and correcting motion artifacts in MRI. In Proceedings of SPIE 6316(Image Reconstruction from Incomplete Data IV): 631608, 12pp. http://dx.doi.org/10.1117/12.681684. (Conference Contributions - Published)

• CMS collaboration. (2006) CMS Physics Technical Design Report Volume I: Detector Performance and Software.Commissioned by CMS Collaboration and CERN. (Reports)

• Hagedorn M., Smith PJ., Bones PJ., Millane RP. and Pairman D. (2006) A trivariate chi-squared distribution derived from the complex Wishart distribution. Journal of Multivariate Analysis 97(3): 655-674. http://dx.doi.org/10.1016/j.jmva.2005.05.014. (Journal Articles)

• Maclaren JR., Bones PJ., Millane RP. and Watts R. (2006) TRELLIS MRI: A Novel Approach to Motion Correction. In ISMRM 2006 Proceedings. (Conference Contributions - Published)

• Peiris MTR., Jones RD., Davidson PR. and Bones PJ. (2006) Detecting behavioral microsleeps from EEG power spectra. In Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings: 5723-5726. http://dx.doi.org/10.1109/IEMBS.2006.260411. (Conference Contributions - Published)

• Peiris MTR., Jones RD., Davidson PR., Carroll GJ. and Bones PJ. (2006) Frequent lapses of responsiveness during an extended visuomotor tracking task in non-sleep-deprived subjects. Journal of Sleep Research 15(3): 291-300. http://dx.doi.org/10.1111/j.1365-2869.2006.00545.x. (Journal Articles)

• Ward D., Jones RD. and Bones PJ. (2006) Enhancement of deep epileptiform activity in the EEG via adaptive 3-D spatial filtering. In : 109-114. (Conference Contributions - Published)

• Wojtas DH., Wu B., Ahnelt PK., Bones PJ. and Millane RP. (2006) Analysis of differential interference contrast microscopy images of the retina. In Proceedings Image and Vision Computing Conference New Zealand 2006: 215-220. (Conference Contributions - Published)

• Bones PJ., Maclaren JR., Millane RP. and Watts R. (2005) Correcting motion artifacts in magnetic resonance imaging. In Proceedings IVCNZ: 120-125. (Conference Contributions - Published)

• Bones PJ., Millane RP. and Bretschneider TR. (2005) Blur identification using image features. In Proceedings SRS, CD-Rom. (Conference Contributions - Published)

• Bones PJ., Millane RP. and Bretschneider TR. (2005) Blur identification using image features. In Proceedings SRS, Optics InfoBase Conference Papers: SMA5/1-3. (Conference Contributions - Published)

• Butler APH., Bones PJ. and Hurrell M. (2005) A method to enhance frontal chest radiographs in the eigen-domain. In Proc. Image Vision Comput., IVCNZ2005: 363-368. (Conference Contributions - Published)

• Jones RD., Peiris MT., Davidson PR., Carroll GJ., Signal TL., Parkin PJ., van den Berg M. and Bones PJ. (2005) Identification of vigilance lapses using EEG/EOG by expert human raters. In 27: 5735-5738. (Conference Contributions - Published)

• Maclaren JR., Bones PJ., Millane RP. and Watts R. (2005) Correction of translational motion artifacts in magnetic resonance imaging. In Procedings of VIIP2005: 448-452. (Conference Contributions - Published)

• Peiris MTR., Jones RD., Davidson PR., Bones PJ. and Myall DJ. (2005) Fractal dimension of the EEG for detection of behavioural microsleeps. In Proceedings 27th EMBS2005. (Conference Contributions - Published)

• Peiris MTR., Jones RD., Davidson PR., Carroll GJ., Signal TL., Parkin PJ., van den Berg M. and Bones PJ. (2005) Identification of vigilance lapses using EEG/EOG by expert human raters. Shanghai, China: 27th IEEE Engineering in Medicine and Biology Society Annual Conference (EMBS2005), 1 Sep 2005. (Conference Contributions - Other)

• Vanrumste B., Jones RD., Bones PJ. and Carroll GJ. (2005) Slow-wave activity arising from the same area as epileptiform activity in the EEG of paediatric patients with focal epilepsy. Clinical Neurophysiology 116(1): 9-17. http://dx.doi.org/10.1016/j.clinph.2004.07.032. (Journal Articles)

• Yoon CH., Bones PJ. and Millane RP. (2005) Image analysis for electron microscopy of muscle fibres. In Proceedings DICTA CD-Rom: 1-7. (Conference Contributions - Published)

• Yoon CH., Bones PJ. and Millane RP. (2005) Image analysis for electron microscopy of muscle fibres. In Proceedings of the Digital Imaging Computing: Techniques and Applications, DICTA 2005 2005: 551-557. http://dx.doi.org/10.1109/DICTA.2005.1578177. (Conference Contributions - Published)

• Yoon CH., Bones PJ. and Millane RP. (2005) Recovery of myosin filament positions in muscle electron micrographs. In Optics InfoBase Conference Papers http://dx.doi.org/10.1364/srs.2005.sma4. (Conference Contributions - Published)

• Yoon CH., Bones PJ. and Millane RP. (2005) Recovery of myosin filament positions in muscle electron micrographs. In Proceedings SRS, Optics InfoBase Conference Papers: SMA4/1-SMA4/1. (Conference Contributions - Published)

• Bodvarsson B., Klim S., Mortensen S., Morkebjerg M., Chen J., Maclaren JR., Yoon CH., Luther PK., Squire JM. and Bainbridge-Smith A. (2004) Determination of myosin filament positions and orientations in electron micrographs of muscle cross-sections. . (Journal Articles)

• Bödvarsson B., Klim S., Mortensen S., Mørkebjerg M., Chen J., Maclaren JR., Yoon CH., Luther PK., Squire JM. and Bainbridge-Smith A. (2004) Determination of myosin filament positions and orientations in electron micrographs of muscle cross-sections. In Proceedings of SPIE - The International Society for Optical Engineering 5562: 97-108. http://dx.doi.org/10.1117/12.562357. (Conference Contributions - Published)

• Bones PJ. and Butler APH. (2004) Eigen-analysis for classifying chest x-ray images. In Proceedings of SPIE 5562: 88-96. http://dx.doi.org/10.1117/12.565175. (Conference Contributions - Published)

• Bones PJ., Fiddy MA. and Millane RP. (2004) Proceedings of SPIE - The International Society for Optical Engineering: Introduction. Proceedings of SPIE - The International Society for Optical Engineering 5562. (Other)

• Catton P. and Macdonald G. (2004) Introduction. In Karl Popper: Critical Appraisals: 1-15. London: Routledge. (Other)

• Dawson R., Bones PJ., Oates B., Brereton P., Azuma M. and Jackson ML. (2004) Empirical methodologies in software engineering. Amsterdam, Netherlands: Eleventh Annual International Workshop on Software Technology and Practice (STEP 2003), 19 Sep 2003. (Conference Contributions - Other)

• Jones RD., Vanrumste B., Bones PJ. and Carroll GJ. (2004) Observing slow EEG activity from same area as spikes in paediatric patients with focal epilepsy by using signal decomposition and dipole modeling. In 16: 2. (Conference Contributions - Published)

• McLoughlin KJ., Bones PJ. and Karssemeijer N. (2004) Noise equalization for detection of microcalcification clusters in direct digital mammogram images. IEEE Transactions on Medical Imaging 23(3): 313-320. http://dx.doi.org/10.1http://dx.doi.org/109/TMI.2004.824240. (Journal Articles)

• Peiris MTR., Jones RD., Carroll GJ. and Bones PJ. (2004) Investigation of lapses of consciousness using a tracking task: preliminary results. In Proceedings of the Proceedings of the 26th Annual International Conference of Engineering in Medicine and Biology Society (EMBC 2004) 7: 4721-4724. (Conference Contributions - Published)

• Peiris MTR., Jones RD., Carroll GJ. and Bones PJ. (2004) Lapses of consciousness during a continuous tracking task. (Abstract). In New Zealand Medical Journal, www.nzma.org.nz/journal/117-1199/1004/. 117. (Conference Contributions - Published)

• Vanrumste B., Jones RD., Bones PJ. and Carroll GJ. (2004) Observing slow EEG activity from same area as spikes in paediatric patients with focal epilepsy by using signal decomposition and dipole modeling. Leuven, Belgium: 16th International Symposium on Mathematical Theory of Networks and Systems (MTNS 2004), 5 Jul 2004. (Conference Contributions - Other)

• Vanrumste B., Jones RD., Bones PJ. and Carroll GJ. (2004) Singular Value Decomposition and Dipole Modelling applied to Observe Background Activity Originating from the Same Area as Epileptiform Events in the EEG of Paediatric Patients with Focal Epilepsy. Malta: 2nd International Conference on Advances in Biomedical Signal and Information Processing (MEDSIP 2004), 5 Sep 2004. (Conference Contributions - Other)

• Vanrumste B., Jones RD., Bones PJ. and Carroll GJ. (2004) Background activity originating from same area as epileptiform events in the EEG of paediatric patients with focal epilepsy. In Conference Proceedings of the 26th Annual International Conference of Engineering in Medicine and Biology Society (EMBC 2004) 7: 4397-4400. (Conference Contributions - Published)

• Vanrumste B., Jones RD., Bones PJ. and Carroll GJ. (2004) Singular value decomposition and dipole modelling applied to observe background activity originating from the same area as epileptiform events in the EEG of paediatric patients with focal epilepsy. In 2: 92-98. (Conference Contributions - Published)

• Yoon CH., Chen J., Maclaren JR., Bodvarsson B., Klim S., Mortensen S., Morkebjerg M., Luther PK., Squire JM. and Bainbridge-Smith A. (2004) Automated analysis of electron micrographs of muscle cross-sections. In. (Conference Contributions - Published)

• Blakeley ND., Bones PJ., Millane RP. and Renaud P. (2003) Efficient frequency-domain sample selection for recovering limited-support images. Journal of the Optical Society of America A 20(1): 67-77. (Journal Articles)

• Lim M., Lin E. and Bones P. (2003) Vowel Effect on Glottal Parameters and the Magnitude of Jaw Opening. Philadelphia, PA, USA: Voice Foundation's 32th Annual Symposium: Care of the Professional Voice, 4 Jun 2003. (Conference Contributions - Other)

• Vanrumste B., Bones PJ., Jones RD. and Carroll G. (2003) Simulation study of the use of independent component analysis (ICA) for detecting focal EEG events. Sydney, Australia: World Congress on Medical Physics and Biomedical Engineering, 24 Aug 2003. (Conference Contributions - Other)

• Blakeley ND., Millane RP., Renaud R. and Bones PJ. (2002) Efficient selection of k-space samples for recovering limited-extent images. In. (Conference Contributions - Published)

• Bones PJ. and Blakeley ND. (2002) Method to recover images from undersampled MR measurements. Rotorua, New Zealand: Annual Conference of Engineering and Physical Sciences in Medicine, EPSM2002, 10 Nov 2002. (Conference Contributions - Other)

• Bones PJ., Fiddy MA. and Millane RP. (2002) Proceedings of SPIE - The International Society for Optical Engineering: Introduction. Proceedings of SPIE - The International Society for Optical Engineering 4792. (Other)

• Bones PJ., McLoughlin KJ. and McLoughlin H. (2002) Data clustering for discrimination of microcalcifications in mammograms. Auckland, New Zealand: Image Vision Computing Conference (IVCNZ2002), 26 Nov 2002. (Conference Contributions - Other)

• Bones PJ; Fiddy MA; Millane RP (Ed.) (2002) Image Reconstruction from Incomplete Data II. Bellingham: SPIE. 226pp. (Edited Volumes)

• Irie K., Wilson BA., Jones RD., Bones PJ. and Anderson TJ. (2002) A laser-based eye-tracking system. Behaviour Research Methods, Instruments, and Computers 34(4): 561-572. (Journal Articles)

• McLoughlin KJ., Bones PJ. and Kovesi PD. (2002) Detection of microcalcification clusters in digital mammogram images. Bremen, Germany: 6th International Workshop on Digital Mammography (IWDM2002), 22 Jun 2002. (Conference Contributions - Other)

• McLoughlin KJ., Bones PJ. and Kovesi PD. (2002) Connective tissue representation for detection of microcalcifications in digital mammograms. In Proceedings of SPIE - The International Society for Optical Engineering 4684 III: 1246-1256. http://dx.doi.org/10.1117/12.467084. (Conference Contributions - Published)

• Vanrumste B., Jones RD. and Bones PJ. (2002) Detection of epileptiform activity in the EEG via singular value decomposition and dipole modelling. In Australasian Physical & Engineering Sciences in Medicine 25(4): 219-219. (Conference Contributions - Published)

• Vanrumste B., Jones RD. and Bones PJ. (2002) Detection of focal activity in the EEG. (Abstract). In http://www.otago.ac.nz/awcbr/proceedings/otago394606.pdf 20: 33-33. (Conference Contributions - Published)

• Vanrumste B., Jones RD. and Bones PJ. (2002) Detection of focal epileptiform activity in the EEG: an SVD and dipole model approach. In Proceedings of the Second Joint EMBS/BMES Conference: 2031-2032. (Conference Contributions - Published)

• Vanrumste B., Jones RD., Bones PJ. and Carroll GJ. (2002) Using signal decomposition and dipole modelling to detect focal activity in the EEG. (Abstract). In New Zealand Medical Journal, www.nzma.org.nz/journal/115-1166/261/ 115. (Conference Contributions - Published)

• Vanrumste B., Mohr M. and Bones PJ. (2002) A multigrid solver in EEG source analysis applying the finite difference method. International Journal of Bioelectromagnetism 4(2): 255-256. (Journal Articles)

• Vanrumste B., Mohr M. and Bones PJ. (2002) Comparing solvers for the forward problem in EEG source analysis applying the finite difference method. Rotorua, New Zealand: Annual Conference of Engineering and Physical Sciences in Medicine (EPSM) 2002, 10 Nov 2002. (Conference Contributions - Other)

• Vanrumste B., Mohr M. and Bones PJ. (2002) A multigrid solver in EEG source analysis applying the finite difference method. In International Journal of Bioelectromagnetics 4(2): 255-256. (Conference Contributions - Published)

• Blakeley ND. and Bones PJ. (2001) Full recovery of limited extent images form regularly undersampled spectra. Dunedin, New Zealand: Proceedings of the Image Vision Computing Conference, IVCNZ2001, 1 Nov 2001. (Conference Contributions - Other)

• Bones PJ. and Blakeley ND. (2001) Partial recovery of limited extent images from regularly undersampled data. Albuquerque, NM, USA: Signal Recovery & Synthesis, 1 Nov 2001. (Conference Contributions - Other)

• Bones PJ., Alwesh N., Connolly TJ. and Blakeley ND. (2001) Recovery of limited-extent images aliased because of spectral undersampling. Journal of the Optical Society of America A 18(9): 2079-2088. (Journal Articles)

• Bones PJ., Blakeley ND. and Millane RP. (2001) Image recovery from irregularly located spectral samples. In Proceedings of the 2001 International Conference on Image Processing (ICIP 2001) 1: 217-220. (Conference Contributions - Published)

• Leung WYV., Bones PJ. and Lane RG. (2001) Statistical interpolation of sampled images. Optical Engineering (SPIE) 40(4): 547-553. (Journal Articles)

• Lim M., Bones PJ., Lin E., Shaw G. and Dove R. (2001) Artifical Speech for Tracheostomized and Ventilated Patients in Intensive Care Unit. Christchurch, New Zealand: Physics and Engineering in Medicine (NZPEM) Annual Conference, 5 Nov 2001. (Conference Contributions - Other)

• McLoughlin KJ., Bones PJ. and Kovesi PD. (2001) Detection of microcalcifications in digital mammograms. Dunedin, New Zealand: Proceedings of the Image Vision Computing Conference, IVCNZ2001, 1 Nov 2001. (Conference Contributions - Other)

• Blakeley ND., Alwesh N., Connolly TJ. and Bones PJ. (2000) Recovery of limited extent images from regularly undersampled spectra. Hamilton, New Zealand: Image Vision Computing Conference, 1 Nov 2000. (Conference Contributions - Other)

• Bones PJ., Bretschneider T., Forne CJ., Millane RP. and McNeill SJ. (2000) Tomographic blur identification using image edges. In : 133-141. (Conference Contributions - Published)

• Bretschneider T., Kao O. and Bones PJ. (2000) Removal of vertical scratches in digitised historical film sequences using wavelet decomposition. Hamilton, New Zealand: Image Vision Computing Conference, 1 Nov 2000. (Conference Contributions - Other)

• Connolly TJ., Alwesh A. and Bones P. (2000) Utilising prior knowledge for superresolution. Bay of Islands, New Zealand: Australian & New Zealand Industrial Applied Mathematics Conference (ANZIAM), 8 Feb 2000. (Conference Contributions - Other)

• Fiddy MA. and Millane RP. (2000) Image reconstruction from incomplete data. Proceedings of SPIE - The International Society for Optical Engineering 4123SPIE. 308. (Edited Volumes)

• Gölz H., Jones RD. and Bones PJ. (2000) Wavelet analysis of transient biomedical signals and its application to detection of epiletiform activity in the EEG. Clinical EEG and Neuroscience Journal 31(4): 181-191. (Journal Articles)

• Hagedorn M., Bones PJ., Wu QX. and Pairman D. (2000) Evaluation of a segmentation algorithm of synthetic aperture radar data. Bay of Islands, New Zealand: Australian & New Zealand Industrial Applied Mathematics (ANZIAM) Conference, 8 Feb 2000. (Conference Contributions - Other)

• Lim MA., Dove RA. and Bones PJ. (2000) Diagnostic ultrasound power meter. In Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings 4: 2644-2655. http://dx.doi.org/10.1109/IEMBS.2000.901404. (Conference Contributions - Published)

• McLoughlin KJ. and Bones PJ. (2000) Segmentation of the breast-air boundary for a digital mammogram image. Hamilton, New Zealand: Image Vision Computing Conference, 1 Nov 2000. (Conference Contributions - Other)

• Alwesh N., Connolly TJ. and Bones PJ. (1999) Recovery of undersampled magnetic resonance images. Christchurch, New Zealand: Proceedings Image & Vision Computing NZ Conference, 1 Aug 1999. (Conference Contributions - Other)

• Bones PJ. and Lane RG. (1999) Statistical basis for image interpolation in Digital Image Recovery and Synthesis IV. Proceedings of SPIE, v3815, 1-1 Jul 1999. (Conference Contributions - Other)

• Bones PJ. and Lane RG. (1999) Statistical basis for image interpolation. In Proceedings of SPIE - The International Society for Optical Engineering 3815: 120-130. (Conference Contributions - Published)

• Bretschneider T., Bones PJ. and McNeill SJ. (1999) Resolution enhancement using multispectral remotely sensed imagery. Christchurch, New Zealand: Proceedings of the Image & Vision Computing NZ Conference, 1 Aug 1999. (Conference Contributions - Other)

• Connolly TJ., Alwesh N. and Bones PJ. (1999) Total variation based superresolution. Christchurch, New Zealand: Proceedings of the Image & Vision Computing NZ Conference, 1 Aug 1999. (Conference Contributions - Other)

• Gölz H., Jones RD. and Bones PJ. (1999) Continuous wavelet transform for the detection and classification of epileptiform activity in the EEG. In. (Conference Contributions - Published)

• Hagedorn M., Bones PJ., Wu QX. and Pairman D. (1999) Segmentation of synthetic aperture radar images. Christchurch, New Zealand: Proceedings Image & Vision Computing NZ Conference, 1 Aug 1999. (Conference Contributions - Other)

• James CJ., Jones RD., Bones PJ. and Carroll GJ. (1999) Detection of epileptiform discharges in the EEG by a hybrid system comprising mimetic, self-organized artificial neural network, and fuzzy logic stages. Clinical Neurophysiology 110(12): 2049-2063. http://dx.doi.org/10.1016/S1388-2457(99)00168-6. (Journal Articles)

• James CJ., Jones RD., Carroll GJ. and Bones PJ. (1999) Detection of epileptiform discharges in the EEG by a hybrid system comprising mimetic, self-organised and fuzzy-logic stages. Clinical Neurophysiology 110(12): 2049-2063. (Journal Articles)

• Leune W., Lane RG. and Bones PJ. (1999) Statistical interpolation of scanned data. Christchurch, New Zealand: Proceedings of the Image & Vision Computing NZ Conference, 1 Aug 1999. (Conference Contributions - Other)

• Ward DM., Jones RD., Bones PJ. and Carroll GJ. (1999) Enhancement of deep epileptiform activity in the EEG via 3-D adaptive spatial filtering. IEEE Trans. Biomed. Eng 46: 707-716. (Journal Articles)

• Alwesh N., Bones PJ. and Connolly TJ. (1998) Superresolution of MR images. Auckland, New Zealand: Proceedings of the Image Vision Comput., 1 Nov 1998. (Conference Contributions - Other)

• Bones PJ., Alwesh N. and Connolly TJ. (1998) Superresolution of MR images. Hawaii, HI, USA: Proceedings of the Summer Topical Meeting, Signal Recovery and Synthesis, 1 Jun 1998. (Conference Contributions - Other)

• James CJ., Jones RD., Bones PJ. and Carroll GJ. (1998) Spatial analysis of multi-channel EEG recordings through a fuzzy-rule based system in the detection of epiletiform events. In : 2175-2178. (Conference Contributions - Published)

• Ward DM., Jones RD., Bones PJ. and Carroll GJ. (1998) Enchancement of deep epileptiform activity in the EEG by 3-D adaptive spatial filtering: simulations and real data. In : 2116-2119. (Conference Contributions - Published)

• Ward DM., Jones RD., Bones PJ. and Carroll GJ. (1998) Enhancement of epileptiform activity in the EEG by 3-D adaptive spatial filtering: Simulations and real data. In Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings 4: 2116-2119. (Conference Contributions - Published)

• Bones PJ., Irwan R. and Lane RG. (1997) Scanning SVD filters for deconvolution. Albany, Auckland: Proceedings Digital Image Computing: Techniques and Applications Conference, 1 Dec 1997. (Conference Contributions - Other)

• James CJ., Hagan MT., Jones RD., Bones PJ. and Carroll GJ. (1997) Multireference adaptive noise cancelling applied to the EEG.. IEEE Trans. Biomed. Eng 44: 775-779. (Journal Articles)

• James CJ., Hagan MT., Jones RD., Bones PJ. and Carroll GJ. (1997) Neural network based spatiotemporal filtering of the EEG. (Abstract). In New Zealand Medical Journal 110: 152-152. (Conference Contributions - Published)

• James CJ., Jones RD., Bones PJ. and Carroll GJ. (1997) Detecting epileptiform discharges in the EEG with the self-organising feature map. (Abstract). In New Zealand Medical Journal 110: 400-400. (Conference Contributions - Published)

• Johnston RA., Alwesh N., Lane RG. and Bones PJ. (1997) Spot image interpolation. Albany, Auckland: Proceedings of the Digital Image Computing: Techniques and Applications Conferenece, 1 Dec 1997. (Conference Contributions - Other)

• Lane RG., Irwan R. and Bones PJ. (1997) The effects of truncation on deconvolution. San Diego, CA, USA: In Computational, Experimental, and Numerical Methods for Solving Ill-Posed Inverse Imaging Problems: Medical and Nonmedical Applications. Proc. SPIE, v3171,, 1 Jan 1997. (Conference Contributions - Other)

• Ward D., Jones RD., Bones P. and Carroll G. (1997) Adaptive spatial filter to enhance deep epileptiform activity in the EEG. (Abstract). In New Zealand Medical Journal 110: 400-400. (Conference Contributions - Published)

• James CJ., Hagan MT., Jones RD., Bones PJ. and Carroll GJ. (1996) Spatio-temporal filtering of the EEG via neural network based multireference adaptive noise cancelling. In : 105-108. (Conference Contributions - Published)

• James CJ., Hagen MT., Jones RD., Bones PJ. and Carroll GJ. (1996) Spatio-Temporal Filtering of the EEG via Neural Network Based Multireference Adaptive Noise Cancelling. In. (Conference Contributions - Published)

• James CJ., Jones RD., Bones PJ. and Carroll GJ. (1996) The self-organising feature map in the detection of epileptiform discharges in the EEG. In : 89-92. (Conference Contributions - Published)

• James CJ., Jones RD., Bones PJ. and Carroll GJ. (1996) The Self-Organising Feature Map in the Detection of Epileptiform Transients in the EEG. In. (Conference Contributions - Published)

• Jones RD., Dingle AA., Carroll GJ., Green RD., Black M., Donaldson IM., Parkin PJ., Bones PJ. and Burgess KL. (1996) System for detecting epileptiform discharges in the EEG: Real-time operation and clinical trial. In Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings 3: 948-949. (Conference Contributions - Published)

• Satherley BL., Jones RD. and Bones PJ. (1996) EEG spectral topography in neurology: I. A review of techniques. Australasian Physical and Engineering Sciences in Medicine 19(3): 172-182. (Journal Articles)

• Satherley BL., Jones RD. and Bones PJ. (1996) EEG spectral topography in neurology: II. A new system and a theoretical comparison of interpolation techniques. Australasian Physical and Engineering Sciences in Medicine 19(3): 183-193. (Journal Articles)

• Wilson BA., Anderson TJ., Preddie J., Jones RD. and Bones PJ. (1996) A flying-spot laser scanner capable of measuring torsional eye movements. (Abstract). In Journal of Vestibular Research 6: S75-S75. (Conference Contributions - Published)

• Wilson BA., Anderson TJ., Preddie J., Jones RD. and Bones PJ. (1996) A flying-spot laser scanner capable of measuring torsional eye movements. (Abstract). In Neuro-ophthalmology 16 (Supp): 177-177. (Conference Contributions - Published)

• Wilson BA., Jones RD., Bones PJ. and Anderson TJ. (1996) A Flying-Spot Laser Scanner for Tracking Eye Movements. In. (Conference Contributions - Published)

• Bones PJ., Parker CR., Satherley BL. and Watson RW. (1995) Deconvolution and phase retrieval with use of zero sheets. Journal of the Optical Society of America A: Optics and Image Science, and Vision 12(9): 1842-1857. http://dx.doi.org/10.1364/JOSAA.12.001842. (Journal Articles)

• Wilson BA., Jones RD., Bones PJ. and Anderson TJ. (1995) A flying spot laser scanner for tracking eye movements. (Abstract). In New Zealand Medical Journal 108: 487-487. (Conference Contributions - Published)

• Cree MJ. and Bones PJ. (1994) Towards Direct Reconstruction from a Gamma Camera Based on Compton Scattering. IEEE Transactions on Medical Imaging 13(2): 398-407. (Journal Articles)

• Cree MJ. and Bones PJ. (1994) Direct reconstruction methods for the Compton scattering camera for use in SPECT. In IEEE Nuclear Science Symposium & Medical Imaging Conference(pt 3): 1927-1930. (Conference Contributions - Published)

• Millane RP., Bones PJ. and Jiang H. (1994) Blind deconvolution for multidimensional images. In ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings 5 http://dx.doi.org/10.1109/ICASSP.1994.389392. (Conference Contributions - Published)

• Parker CR., Satherley BL. and Bones PJ. (1994) Image reconstruction from zeros of the z-transform. In ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings 5 http://dx.doi.org/10.1109/ICASSP.1994.389387. (Conference Contributions - Published)

• Satherley BL. and Bones PJ. (1994) Zero tracks for blind deconvolution of blurred ensembles. Applied Optics 33(11): 2197-2205. http://dx.doi.org/10.1364/AO.33.002197. (Journal Articles)

• Wilson BA., Bones PJ. and Jones RD. (1994) Weighted phase-correlation. In (1.8.): 1-8. (Conference Contributions - Published)

• Bones PJ., Satherley BL., Parker CR. and Watson RW. (1993) Non-iterative methods for image deconVolution. In Proceedings of SPIE - The International Society for Optical Engineering 2029: 2-13. http://dx.doi.org/10.1117/12.161985. (Conference Contributions - Published)

• Cree MJ. and Bones PJ. (1993) Algorithms to numerically evaluate the Hankel transform. Computers and Mathematics with Applications 26(1): 1-12. http://dx.doi.org/10.1016/0898-1221(93)90081-6. (Journal Articles)

• Bones PJ. and Blundell BG. (1992) Software engineering for electrical engineers. International Journal of Electrical Engineering Education 29(2): 183-185. http://dx.doi.org/10.1177/002072099202900216. (Journal Articles)

• Parker CR. and Bones PJ. (1992) Convergence of iterative phase retrieval improved by utilizing zero sheets. Optics Communications 92(4-6): 209-214. http://dx.doi.org/10.1016/0030-4018(92)90623-Y. (Journal Articles)

• Watson RW., Parker CR. and Bones PJ. (1992) Demonstration of two-dimensional consistent deconvolution using zeros. Optics Communications 93(5-6): 359-365. http://dx.doi.org/10.1016/0030-4018(92)90200-B. (Journal Articles)

• Bones PJ. and Garden KL. (1991) Contributions of Professor R.H.T. Bates to the Physical Sciences and Engineering in Medicine. Australasian Physical and Engineering Sciences in Medicine 14(4): 178-184. (Journal Articles)

• Bones PJ., Griffin TC. and Carey-Smith CM. (1990) Segmentation of document images. In Proceedings of SPIE - The International Society for Optical Engineering 1258: 78-88. (Conference Contributions - Published)

• Jans R., Elder AG., Jones RD., Fright WR. and Bones PJ. (1990) Low cost ECG central station for intensive care. Australasian Physical and Engineering Sciences in Medicine 13(1): 31-35. (Journal Articles)

• Garden KL., Bones PJ. and Bates RHT. (1989) From living being to medical image. Bridging the dimensionality gap. Australasian Physical and Engineering Sciences in Medicine 12(4): 186-204. (Journal Articles)

• Wu QX., Bones PJ. and Bates RHT. (1989) Translational motion compensation for coronary angiogram sequences. IEEE Transactions on Medical Imaging 8(3): 276-282. http://dx.doi.org/10.1109/42.34717. (Journal Articles)

• Bones PJ. and Bates RHT. (1988) Illustrating the effectiveness of surface admittances (impedances) for simplifying modelling physiological (ECG/EEG) potential fields. Australasian Physical and Engineering Sciences in Medicine 11(3): 94-99. (Journal Articles)

• Fright WR., Jans R., Elder AG., Bones PJ. and Jones RD. (1987) An ECG central station for intensive care. In Proceedings of Institution of Professional Engineers New Zealand Annual Conference, Christchurch, New Zealand 2: 143-146. (Conference Contributions - Published)

• Tremewan RN., Peters TM., Bones P. and Tait JJ. (1987) LOW RESOLUTION CT SCANNER IN RADIOTHERAPY PLANNING.. Australasian Physical and Engineering Sciences in Medicine 10(4): 196-200. (Journal Articles)

• Wu QX. and Bones PJ. (1987) REMOVAL OF SPIKE INTERFERENCE FROM DIGITISED ANGIOGRAPHIC IMAGES.. Australasian Physical and Engineering Sciences in Medicine 10(2): 96-101. (Journal Articles)

• Monro DM., Bones PJ. and Stanbridge RL. (1986) Comparison of epicardial and body surface ECG potentials in man. Cardiovascular Research 20(3): 201-207. (Journal Articles)

• Nicholls MG., Espiner EA., Ikram H., Maslowski AH., Hamilton EJ. and Bones PJ. (1984) Hormone and blood pressure relationships in primary aldosteronism. Clinical and Experimental Hypertension A6(8): 1441-1458. http://dx.doi.org/10.3109/10641968409044061. (Journal Articles)

• Bones PJ. and Ikram H. (1983) ALGORITHM FOR THE RAPID ANALYSIS OF 24-HOUR AMBULATORY RECORDINGS OF INTRAARTERIAL BLOOD PRESSURE.. In Computers in Cardiology: 465-466. (Conference Contributions - Published)

• Bones PJ., Mackay DR., Raymond RB. and Ikram H. (1983) HIGH-SPEED SINGLE-SCAN ANALYSIS OF HOLTER ELECTROCARDIOGRAMS WITH A MICROPROCESSOR.. In Computers in Cardiology: 189. (Conference Contributions - Published)

• Maslowski AH., Nicholls MG., Espiner EA., Ikram H. and Bones PJ. (1983) Mechanisms in human renovascular hypertension. Hypertension 5(4): 597-602. http://dx.doi.org/10.1161/01.HYP.5.4.597. (Journal Articles)

• Bones PJ. and Bates RHT. (1981) Computational assessment of electrocardiographic measurement sensitivity. Medical & Biological Engineering & Computing 19(6): 717-724. http://dx.doi.org/10.1007/BF02441333. (Journal Articles)

• Ikram H., Chan WC., Bones PJ. and Sherry E. (1980) Factors Influencing the Diagnostic Sensitivity of the Exercise Test in Coronary Artery Disease. Angiology 31(4): 246-253. http://dx.doi.org/10.1177/000331978003100404. (Journal Articles)

• Hore P., Bones P., Rollinson T. and Ikram H. (1979) A pharmacokinetic comparison of two sustained‐release oral procainamide preparations.. British Journal of Clinical Pharmacology 8(3): 267-271. http://dx.doi.org/10.1111/j.1365-2125.1979.tb01013.x. (Journal Articles)

• Ikram H., Chan W., Bennett SI. and Bones PJ. (1979) Haemodynamic effects of acute beta-adrenergic receptor blockade in congestive cardiomyopathy. British Heart Journal 42(3): 311-315. http://dx.doi.org/10.1136/hrt.42.3.311. (Journal Articles)

• Ikram H., Marshall DE., Moore SM. and Bones PJ. (1979) Hypertension in valvar aortic stenosis. New Zealand Medical Journal 89(632): 204-207. (Journal Articles)

• Lewis GRJ., Morley KD., Maslowski AH. and Bones PJ. (1979) Verapamil in the Management of Hypertensive Patients. Australian and New Zealand Journal of Medicine 9(1): 62-64. http://dx.doi.org/10.1111/j.1445-5994.1979.tb04115.x. (Journal Articles)

• Lewis GRJ., Morley KD., Lewis BM. and Bones PJ. (1978) The treatment of hypertension with verapamil. New Zealand Medical Journal 87(612): 351-354. (Journal Articles)

• Bones PJ. and Ikram H. (1977) A method of left ventricular ejection fraction estimation from cineangiocardiograms employing a special-purpose calculator. Cardiovascular Research 11(5): 470-474. http://dx.doi.org/10.1093/cvr/11.5.470. (Journal Articles)

• Ikram H., Drysdale P., Bones PJ. and Chan W. (1977) The non-invasive recognition of left atrial enlargement: Comparison of electro- and echocardiographic measurements. Postgraduate Medical Journal 53(621): 356-359. http://dx.doi.org/10.1136/pgmj.53.621.356. (Journal Articles)

Review and Refereeing

• Journal of Opt Soc Amer A; IEEE Trans Medical Imaging; IEEE Trans Biomed Eng; Physics journals; Journal of Applied Optics; Med & Biol Eng & Comp; Australasian Phys Eng Sci Med ( 2000 - 2005)
• Journal of Opt Soc Amer A; Inst of Physics; Journal of Applied Optics; Med & Biol Eng & Comp; Australasian Phys Eng Sci Med ( 1997 - 2002)

Research Groups